RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 AMTNQ6UX39 209 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 ODF3Q96PU9 254 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 TMEM208Q9BTX3 173 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 C1QTNF4Q9BXJ3 329 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 TIMM8BQ9Y5J9 83 aaPredicted RBP7.15□□□□□ -1.27
PSEN1-213ENST00000555386 IGLV2-18A0A075B6J9 118 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 A0A0J9YWU9 116 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 H0Y8G0 127 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 K7EMI3 77 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 HTN1P15515 57 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
PSEN1-213ENST00000555386 EVI2AP22794 236 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 STPG4Q8N801 248 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 NRACQ8N912 160 aa7.14□□□□□ -1.27
PSEN1-213ENST00000555386 KLLNB2CW77 178 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 H3BVH4 76 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 M0R381 172 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 DLEU1O43261 78 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 ATP5LO75964 103 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 PPP1R17O96001 155 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 INSP01308 110 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 PRM2P04554 102 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 LEPP41159 167 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 CSNK1G2-AS1Q8NCQ2 148 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 ORAOV1Q8WV07 137 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
PSEN1-213ENST00000555386 NXPH4O95158 308 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 S100A4P26447 101 aaKnown RBP7.12□□□□□ -1.27
PSEN1-213ENST00000555386 RNASE4P34096 147 aaKnown RBP7.12□□□□□ -1.27
PSEN1-213ENST00000555386 CDKN1BP46527 198 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 HINT1P49773 126 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-213ENST00000555386 EMP1P54849 157 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 LAGE3Q14657 143 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 C20orf78Q9BR46 151 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
PSEN1-213ENST00000555386 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 IGHV4-28A0A0C4DH34 117 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 A8MTW9 85 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 SIVA1O15304 175 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 ANXA2RQ3ZCQ2 193 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 POM121L12Q8N7R1 296 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 LINC01587Q99440 93 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 PHLDA3Q9Y5J5 127 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 GAS8-AS1O95177 125 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 RBMY1A1P0DJD3 496 aaKnown RBP7.11□□□□□ -1.27
PSEN1-213ENST00000555386 RBMY1CP0DJD4 496 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 GATA1P15976 413 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-213ENST00000555386 G0S2P27469 103 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 RBMY1FQ15415 496 aaKnown RBP7.11□□□□□ -1.27
PSEN1-213ENST00000555386 ORMDL2Q53FV1 153 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 Q6ZQT7 251 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 AP1S3Q96PC3 154 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 X6R8D5 127 aa7.11□□□□□ -1.27
PSEN1-213ENST00000555386 SMIM17P0DL12 118 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 FGF6P10767 208 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
PSEN1-213ENST00000555386 RPL32P62910 135 aaKnown RBP7.1□□□□□ -1.27
PSEN1-213ENST00000555386 ODF1Q14990 250 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 MPV17L2Q567V2 206 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 BVES-AS1Q5T3Y7 98 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
PSEN1-213ENST00000555386 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 C7orf71A4D174 169 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 NUDT3O95989 172 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
PSEN1-213ENST00000555386 RRN3P1Q2M238 152 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 Q8NAQ8 132 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 EDA2RQ9HAV5 297 aa7.09□□□□□ -1.27
PSEN1-213ENST00000555386 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 TRAV26-2A0A0B4J265 109 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 PRSS1P07477 247 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 MIFP14174 115 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 AZU1P20160 251 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 SEC11AP67812 179 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 C2orf91Q6ZV80 131 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 RASL10AQ92737 203 aa7.08□□□□□ -1.28
PSEN1-213ENST00000555386 GNRH2O43555 120 aa7.07□□□□□ -1.28
PSEN1-213ENST00000555386 DPM2O94777 84 aa7.07□□□□□ -1.28
PSEN1-213ENST00000555386 IGKCP01834 107 aa7.07□□□□□ -1.28
PSEN1-213ENST00000555386 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
PSEN1-213ENST00000555386 C14orf178Q8N769 122 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-213ENST00000555386 C18orf15Q96N68 181 aa7.07□□□□□ -1.28
PSEN1-213ENST00000555386 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
PSEN1-213ENST00000555386 A0A087WX48 190 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 CBY3A6NI87 242 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-213ENST00000555386 TMEM97Q5BJF2 176 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 IL17DQ8TAD2 202 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 C11orf45Q8TAV5 145 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 MUC7Q8TAX7 377 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 CELA1Q9UNI1 258 aa7.06□□□□□ -1.28
PSEN1-213ENST00000555386 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms