RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SCGB2A2Q13296 93 aa17.59■□□□□ 0.41
STRN3-207ENST00000555358 GAGE13Q4V321 117 aa17.59■□□□□ 0.41
STRN3-207ENST00000555358 ZFP2Q6ZN57 461 aa17.59■□□□□ 0.41
STRN3-207ENST00000555358 LY6G6DO95868 133 aa17.58■□□□□ 0.4
STRN3-207ENST00000555358 ETDBQ3ZM63 59 aa17.58■□□□□ 0.4
STRN3-207ENST00000555358 TCTEX1D4Q5JR98 221 aa17.58■□□□□ 0.4
STRN3-207ENST00000555358 FAM159AQ6UWV7 190 aa17.57■□□□□ 0.4
STRN3-207ENST00000555358 MTURNQ8N3F0 131 aa17.57■□□□□ 0.4
STRN3-207ENST00000555358 UBE2D1P51668 147 aa17.57■□□□□ 0.4
STRN3-207ENST00000555358 CD300EQ496F6 205 aaPredicted RBP17.57■□□□□ 0.4
STRN3-207ENST00000555358 KLHL30-AS1Q8NEE0 82 aa17.57■□□□□ 0.4
STRN3-207ENST00000555358 PGPEP1Q9NXJ5 209 aa17.57■□□□□ 0.4
STRN3-207ENST00000555358 SETD2Q9BYW2 2564 aaPredicted RBP17.57■□□□□ 0.4
STRN3-207ENST00000555358 DEFB136Q30KP8 78 aa17.56■□□□□ 0.4
STRN3-207ENST00000555358 SCGB1D4Q6XE38 83 aa17.56■□□□□ 0.4
STRN3-207ENST00000555358 DCANP1Q8TF63 244 aa17.56■□□□□ 0.4
STRN3-207ENST00000555358 K7EMT4 169 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 RPL39P62891 51 aaKnown RBP17.55■□□□□ 0.4
STRN3-207ENST00000555358 PMVKQ15126 192 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 DEFB104AQ8WTQ1 72 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 SPAG8Q99932 426 aaPredicted RBP17.55■□□□□ 0.4
STRN3-207ENST00000555358 TSSC4Q9Y5U2 329 aaPredicted RBP17.55■□□□□ 0.4
STRN3-207ENST00000555358 A0A087WWL8 130 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 LINC01549A6NIU2 74 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 EMP1P54849 157 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 PAPPA-AS1Q5QFB9 102 aa17.55■□□□□ 0.4
STRN3-207ENST00000555358 TMEM238LA0A1B0GVL6 79 aa17.54■□□□□ 0.4
STRN3-207ENST00000555358 A6NJY4 79 aa17.54■□□□□ 0.4
STRN3-207ENST00000555358 SYNJ2BPP57105 145 aa17.54■□□□□ 0.4
STRN3-207ENST00000555358 WFDC12Q8WWY7 111 aa17.54■□□□□ 0.4
STRN3-207ENST00000555358 VCYO14598 125 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 HOXD3P31249 432 aaPredicted RBP17.53■□□□□ 0.4
STRN3-207ENST00000555358 TMEM141Q96I45 108 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 MRPL16Q9NX20 251 aaKnown RBP17.53■□□□□ 0.4
STRN3-207ENST00000555358 TRAV12-3A0A0B4J271 114 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 J3QR89 54 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 CD7P09564 240 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 SAMD13Q5VXD3 122 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 TIMM17AQ99595 171 aa17.53■□□□□ 0.4
STRN3-207ENST00000555358 GAGE12HA6NDE8 117 aa17.52■□□□□ 0.4
STRN3-207ENST00000555358 ID1P41134 155 aa17.52■□□□□ 0.4
STRN3-207ENST00000555358 SRSF9Q13242 221 aaKnown RBP eCLIP17.52■□□□□ 0.4
STRN3-207ENST00000555358 KHDC1LQ5JSQ8 128 aa17.52■□□□□ 0.4
STRN3-207ENST00000555358 A0A0J9YY99 117 aa17.52■□□□□ 0.39
STRN3-207ENST00000555358 KIR2DL4Q99706 377 aa17.52■□□□□ 0.39
STRN3-207ENST00000555358 SDHAF1A6NFY7 115 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 LGALS9O00182 355 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 RNASE1P07998 156 aaKnown RBP17.51■□□□□ 0.39
STRN3-207ENST00000555358 AZU1P20160 251 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 HERVK_113P61574 105 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 GTSF1LQ9H1H1 148 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 TRBV27A0A0K0K1C4 114 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 TSPAN13O95857 204 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 DUX3Q96PT4 197 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 SIGMAR1Q99720 223 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 SPATA25Q9BR10 227 aa17.51■□□□□ 0.39
STRN3-207ENST00000555358 TRBV6-5A0A0K0K1A5 114 aa17.5■□□□□ 0.39
STRN3-207ENST00000555358 F5H697 171 aa17.5■□□□□ 0.39
STRN3-207ENST00000555358 TSPEAR-AS2P59090 65 aa17.5■□□□□ 0.39
STRN3-207ENST00000555358 C9orf85Q96MD7 179 aa17.5■□□□□ 0.39
STRN3-207ENST00000555358 SLURP1P55000 103 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 C11orf44Q8N8P7 122 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 INSL3P51460 131 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 ZNF876PQ49A33 203 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 ZNRF2Q8NHG8 242 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 ZNF418Q8TF45 676 aaPredicted RBP17.49■□□□□ 0.39
STRN3-207ENST00000555358 HIVEP1P15822 2718 aa17.49■□□□□ 0.39
STRN3-207ENST00000555358 IGHV3-16A0A0C4DH30 117 aa17.48■□□□□ 0.39
STRN3-207ENST00000555358 HILS1P60008 231 aa17.48■□□□□ 0.39
STRN3-207ENST00000555358 CFAP126Q5VTH2 177 aa17.48■□□□□ 0.39
STRN3-207ENST00000555358 DLX4Q92988 240 aaPredicted RBP17.48■□□□□ 0.39
STRN3-207ENST00000555358 SMCPP49901 116 aaPredicted RBP17.47■□□□□ 0.39
STRN3-207ENST00000555358 FLNBO75369 2602 aaKnown RBP17.47■□□□□ 0.39
STRN3-207ENST00000555358 SCGB1A1P11684 91 aa17.47■□□□□ 0.39
STRN3-207ENST00000555358 UBE2D3P61077 147 aa17.47■□□□□ 0.39
STRN3-207ENST00000555358 UBE2D2P62837 147 aa17.47■□□□□ 0.39
STRN3-207ENST00000555358 C4orf3Q8WVX3 66 aa17.47■□□□□ 0.39
STRN3-207ENST00000555358 ODF3Q96PU9 254 aa17.47■□□□□ 0.39
STRN3-207ENST00000555358 FAM74A4Q5TZK3 123 aa17.46■□□□□ 0.39
STRN3-207ENST00000555358 LINC01006Q8NI28 216 aa17.46■□□□□ 0.39
STRN3-207ENST00000555358 AMELXQ99217 191 aa17.46■□□□□ 0.39
STRN3-207ENST00000555358 MDFICQ9P1T7 246 aa17.46■□□□□ 0.39
STRN3-207ENST00000555358 NDUFA11Q86Y39 141 aa17.45■□□□□ 0.38
STRN3-207ENST00000555358 SETXQ7Z333 2677 aaKnown RBP17.45■□□□□ 0.38
STRN3-207ENST00000555358 IGHV3-30P01768 117 aa17.45■□□□□ 0.38
STRN3-207ENST00000555358 IGHV3-30-5P0DP03 117 aa17.45■□□□□ 0.38
STRN3-207ENST00000555358 TMEM170BQ5T4T1 132 aa17.45■□□□□ 0.38
STRN3-207ENST00000555358 NSD1Q96L73 2696 aaPredicted RBP17.45■□□□□ 0.38
STRN3-207ENST00000555358 M0QY20 66 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 APOMO95445 188 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 ZNF688P0C7X2 276 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 SMAGPQ0VAQ4 97 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 TRAV12-2A0A075B6T6 113 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 A0A0J9YX75 114 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 INAFM1C9JVW0 142 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 SLC25A29Q8N8R3 303 aa17.44■□□□□ 0.38
STRN3-207ENST00000555358 ZNF256Q9Y2P7 627 aaPredicted RBP17.44■□□□□ 0.38
STRN3-207ENST00000555358 CD28P10747 220 aa17.43■□□□□ 0.38
STRN3-207ENST00000555358 SFTA2Q6UW10 78 aa17.43■□□□□ 0.38
STRN3-207ENST00000555358 WNK1Q9H4A3 2382 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms