RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 KLLNB2CW77 178 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 H3BT86 120 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 UBE2L6O14933 153 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TCL1BO95988 128 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 PRR3P79522 188 aaKnown RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 LGALS9BQ3B8N2 356 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 LGALS9CQ6DKI2 356 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 MORN3Q6PF18 240 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 AMTNQ6UX39 209 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF575Q86XF7 245 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM256Q8N2U0 113 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 Q8N7P7 452 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 RPS4Y2Q8TD47 263 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 AQP3Q92482 292 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 C2orf50Q96LR7 162 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 IMUPQ9GZP8 106 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 SLC25A22Q9H936 323 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TNFRSF19Q9NS68 423 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 LHFPL6Q9Y693 200 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 R4GMQ9 66 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV1-58A0A0C4DH39 117 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV7-6A0A0J9YX20 115 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ODF3BA8MYP8 253 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 NDUFC2-KCTD14E9PQ53 114 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 C3orf84H3BNL1 204 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 K7N7A8 449 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 NUPR1O60356 82 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 COX7A2P2O60397 106 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 LGALS3P17931 250 aaKnown RBP2□□□□□ -2.09
PRPF39-206ENST00000554429 KRTAP5-9P26371 169 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 HBBP68871 147 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 SPANXN5Q5MJ07 72 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 LYPD2Q6UXB3 125 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 Q6ZQT7 251 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 VMO1Q7Z5L0 202 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ATP6V0E2Q8NHE4 81 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
PRPF39-206ENST00000554429 WWC2-AS2Q96NR7 200 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 CCL13Q99616 98 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 B9D2Q9BPU9 175 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 SLC39A9Q9NUM3 307 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 MSRB1Q9NZV6 116 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM14AQ9Y6G1 99 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 TNCP24821 2201 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 hADV29S1A0JD25 119 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 DIRC3C9JPN6 131 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 F2Z2F3 143 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV4-59P01825 116 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 HLA-DRB4P13762 266 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF138P52744 262 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
PRPF39-206ENST00000554429 SEC11AP67812 179 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF345Q14585 488 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 VGLL1Q99990 258 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF702PQ9H963 129 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 CCL28Q9NRJ3 127 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF580Q9UK33 172 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 HLA-DRB4X5D2U9 266 aa2□□□□□ -2.09
PRPF39-206ENST00000554429 UBE2L5PA0A1B0GUS4 154 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 A6NDX4 124 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 C17orf98A8MV24 154 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3-48P01763 117 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 CD24P25063 80 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 EBI3Q14213 229 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 LCA10Q71F78 164 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 TAF15Q92804 592 aaKnown RBP eCLIP1.99□□□□□ -2.09
PRPF39-206ENST00000554429 SMIM7Q9BQ49 75 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 XCL2Q9UBD3 114 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV6-1A0A0B4J1U7 121 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3-43A0A0B4J1X8 118 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1-12A0A0C4DH73 117 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 KRTAP29-1A8MX34 341 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-206ENST00000554429 K7EIL1 84 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 ATP6V0E1O15342 81 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1D-12P01611 117 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 CD7P09564 240 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3-43DP0DP04 118 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 COX7CP15954 63 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 NPC2P61916 151 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 S100A7L2Q5SY68 101 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 MINOS1Q5TGZ0 78 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF818PQ6ZRF7 136 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 TEN1Q86WV5 123 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM61Q8N0U2 210 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 RAB37Q96AX2 223 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 ABHD14BQ96IU4 210 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 GAFA1Q96PS6 74 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 AQP10Q96PS8 301 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 NMES1Q9C002 83 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 SERP1Q9Y6X1 66 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 MINOS1-NBL1R4GNA1 71 aa1.99□□□□□ -2.09
PRPF39-206ENST00000554429 A0A087WWC5 75 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3OR16-9A0A0B4J2B5 98 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM14DPA8MWL7 114 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGLL5B9A064 214 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF688P0C7X2 276 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms