RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 C15orf54Q8N8G6 183 aa4.34□□□□□ -1.71
LINC00520-203ENST00000554221 ZNF471Q9BX82 626 aaPredicted RBP4.34□□□□□ -1.71
LINC00520-203ENST00000554221 TRBV6-8A0A0A6YYG3 113 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 TRBV10-1A0A0K0K1A3 114 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 TRBV6-1A0A0K0K1D8 114 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 PFDN1O60925 122 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 CRPP02741 224 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 S100A9P06702 114 aaKnown RBP4.33□□□□□ -1.72
LINC00520-203ENST00000554221 SMIM17P0DL12 118 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 RAB4BP61018 213 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 UBE2D3P61077 147 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 UBE2D2P62837 147 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 Q0VG73 95 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 RGS21Q2M5E4 152 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 ENHOQ6UWT2 76 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 KCNRGQ8N5I3 272 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 OR10AG1Q8NH19 301 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 MBD3L1Q8WWY6 194 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 DAZAP1Q96EP5 407 aaKnown RBP4.33□□□□□ -1.72
LINC00520-203ENST00000554221 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 DERL1Q9BUN8 251 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 TPPP3Q9BW30 176 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
LINC00520-203ENST00000554221 KANTRA0A1W2PQU2 76 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 G3V3Q6 166 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 IGLV2-8P01709 118 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 NEXN-AS1Q8NBZ9 246 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 DPH3Q96FX2 82 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 TCEAL7Q9BRU2 100 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 CHCHD7Q9BUK0 85 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
LINC00520-203ENST00000554221 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
LINC00520-203ENST00000554221 A0A0D9SG52 128 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 HLA-DQA1P01909 254 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 MGPP08493 103 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 GZMBP10144 247 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 CCL20P78556 96 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 GAGE6Q13070 117 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 C14orf177Q52M58 125 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 Q6ZSA8 131 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 OR10G8Q8NGN5 311 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 GNG13Q9P2W3 67 aa4.31□□□□□ -1.72
LINC00520-203ENST00000554221 USP17L23D6RBM5 183 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
LINC00520-203ENST00000554221 RAB5CP51148 216 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 OR2D3Q8NGH3 330 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 MLST8Q9BVC4 326 aa4.3□□□□□ -1.72
LINC00520-203ENST00000554221 IGLV10-54A0A075B6I4 117 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 TRBV25-1A0A075B6N4 114 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 RAB19A4D1S5 217 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 HMSDA8MTL9 139 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
LINC00520-203ENST00000554221 H3BS24 57 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 BCL2L11O43521 198 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 SNAI2O43623 268 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 OR5AL1P0C617 328 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 PKIAP61925 76 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 RBX1P62877 108 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 EIF5AP63241 154 aaKnown RBP4.29□□□□□ -1.72
LINC00520-203ENST00000554221 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
LINC00520-203ENST00000554221 IGHV1-24A0A0C4DH33 117 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 PRSS1P07477 247 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 CXCL1P09341 107 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 NKX2-5P52952 324 aaPredicted RBP4.28□□□□□ -1.72
LINC00520-203ENST00000554221 ZNF345Q14585 488 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 MIAQ16674 131 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 CENPWQ5EE01 88 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 AP1S3Q96PC3 154 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 MED9Q9NWA0 146 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 KIF25-AS1Q9Y6Z4 181 aa4.28□□□□□ -1.72
LINC00520-203ENST00000554221 XKRY2A2RUG3 117 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 H7C1H1 209 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 M0QY20 66 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 UBE2L6O14933 153 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 IFNA1P01562 189 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 P01737 135 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 NTF3P20783 257 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 GNG4P50150 75 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 RPS20P60866 119 aaKnown RBP4.27□□□□□ -1.73
LINC00520-203ENST00000554221 RPL37AP61513 92 aaKnown RBP4.27□□□□□ -1.73
LINC00520-203ENST00000554221 CACNG7P62955 275 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 REG3AQ06141 175 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 LYZL1Q6UWQ5 148 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 MANBALQ9NQG1 85 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 VAX2Q9UIW0 290 aa4.27□□□□□ -1.73
LINC00520-203ENST00000554221 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms