RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 COX6A2Q02221 97 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 INSL4Q14641 139 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 ZNF818PQ6ZRF7 136 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 SPTSSAQ969W0 71 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 SDF2Q99470 211 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 CCDC167Q9P0B6 97 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 CASKIN1Q8WXD9 1431 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 CFTRP13569 1480 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 CACNA1HO95180 2353 aa0.09□□□□□ -2.39
LINC00648-201ENST00000553747 ARFGEF1Q9Y6D6 1849 aa0.09□□□□□ -2.39
LINC00648-201ENST00000553747 TRBV10-3A0A0K0K1G6 114 aa0.09□□□□□ -2.4
LINC00648-201ENST00000553747 APOC4-APOC2K7ER74 178 aa0.09□□□□□ -2.4
LINC00648-201ENST00000553747 NDUFB6O95139 128 aa0.09□□□□□ -2.4
LINC00648-201ENST00000553747 RPL7L1Q6DKI1 246 aaKnown RBP0.09□□□□□ -2.4
LINC00648-201ENST00000553747 Q6ZRX8 168 aa0.09□□□□□ -2.4
LINC00648-201ENST00000553747 GPR98Q8WXG9 6306 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 PRDM2Q13029 1718 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 TRGV1A0A0A0MS02 117 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 FAM92AA1XBS5 289 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 UBE2G1P62253 170 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 S100A12P80511 92 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 Q5BKY6 102 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 Q5VV11 94 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 WFDC6Q9BQY6 131 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 MYH6P13533 1939 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 ABCA12Q86UK0 2595 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 ABCA4P78363 2273 aa0.08□□□□□ -2.4
LINC00648-201ENST00000553747 PTPRZ1P23471 2315 aaPredicted RBP0.08□□□□□ -2.4
LINC00648-201ENST00000553747 SHROOM2Q13796 1616 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 BIVM-ERCC5R4GMW8 1640 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 TRAV1-2A0A0B4J238 106 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 SPAARA0A1B0GVQ0 90 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 A6NIN4 97 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 CCL8P80075 99 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 KCNRGQ8N5I3 272 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 DPH3Q96FX2 82 aa0.07□□□□□ -2.4
LINC00648-201ENST00000553747 G3V318 75 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 SNCGO76070 127 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 SPINK1P00995 79 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 GCHFRP30047 84 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 ARPC4P59998 168 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 COPS9Q8WXC6 57 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 ZMYM4Q5VZL5 1548 aa0.06□□□□□ -2.4
LINC00648-201ENST00000553747 MBD5Q9P267 1494 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 C12orf73Q69YU5 71 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 Q6AWC8 147 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 SPTSSBQ8NFR3 76 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 SNRNP25Q9BV90 132 aaKnown RBP0.05□□□□□ -2.4
LINC00648-201ENST00000553747 FOCADQ5VW36 1801 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 IGF2RP11717 2491 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 QRICH2Q9H0J4 1663 aa0.05□□□□□ -2.4
LINC00648-201ENST00000553747 ZNF609O15014 1411 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 MRC1P22897 1456 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 PIN1P1O15428 100 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 SIX6O95475 246 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 CCL18P55774 89 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 UBE2DNLQ8IWF7 75 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 ARL11Q969Q4 196 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 PDCD10Q9BUL8 212 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 RERGLQ9H628 205 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 LINC00312Q9Y6C7 94 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 LRRC37A2A6NM11 1700 aa0.04□□□□□ -2.4
LINC00648-201ENST00000553747 CELSR2Q9HCU4 2923 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 PIGBOS1A0A0B4J2F0 54 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 NDUFA2O43678 99 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 HMGN1P05114 100 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 SELENOWP63302 87 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 BTG2P78543 158 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 CCDC58Q4VC31 144 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 S100A7L2Q5SY68 101 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 BAGE3Q86Y29 109 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 FAM213BQ8TBF2 198 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 SEC11CQ9BY50 192 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 CNFNQ9BYD5 112 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 LINC00470Q9BZP3 86 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 PATJQ8NI35 1801 aa0.03□□□□□ -2.4
LINC00648-201ENST00000553747 MYO7AQ13402 2215 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 ARAP2Q8WZ64 1704 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 OTOGQ6ZRI0 2925 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 NCOR2Q9Y618 2525 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 TRAV13-2A0A0B4J235 113 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 SMIM6P0DI80 62 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 Q8N8P6 123 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 C1orf54Q8WWF1 131 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 AGPAT4-IT1Q9H0P7 198 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 SERP1Q9Y6X1 66 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 POLQO75417 2590 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 NAIPQ13075 1403 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 PPIP5K1Q6PFW1 1433 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 MED13LQ71F56 2210 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
LINC00648-201ENST00000553747 NHSL1Q5SYE7 1610 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 CUL7Q14999 1698 aa0.02□□□□□ -2.41
LINC00648-201ENST00000553747 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 KDM3BQ7LBC6 1761 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
LINC00648-201ENST00000553747 ZNF815PA8K554 130 aa0.01□□□□□ -2.41
LINC00648-201ENST00000553747 HCG22E2RYF7 251 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms