RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 NEXN-AS1Q8NBZ9 246 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 PTPRZ1P23471 2315 aaPredicted RBP3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGHV1-18A0A0C4DH31 117 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 DEFB108AA8MXU0 73 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 SRRM5B3KS81 715 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 TFF1P04155 84 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 LINC01547P58512 204 aaPredicted RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 UBE2D3P61077 147 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 UBE2D2P62837 147 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 SPTA1P02549 2419 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 DCHS1Q96JQ0 3298 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 K7EMT4 169 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 LINC00205P59089 165 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 RIGQ13278 110 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 FAM53AQ6NSI3 398 aaPredicted RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 SBSPONQ8IVN8 264 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 DHRS4-AS1Q9P1J3 65 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 SPTBN1Q01082 2364 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 ZFP36P26651 326 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 EBI3Q14213 229 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 FAM223AQ8IWN6 122 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 C20orf197Q8N268 126 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 RPP21Q9H633 154 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
RDH11-204ENST00000553578 SPTAN1Q13813 2472 aaKnown RBP3.04□□□□□ -1.92
RDH11-204ENST00000553578 TRBV7-3A0A075B6L6 115 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 IGHV3-43A0A0B4J1X8 118 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 IGHV3-43DP0DP04 118 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 HLA-DMBP28068 263 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 RPL18AQ02543 176 aaKnown RBP3.03□□□□□ -1.92
RDH11-204ENST00000553578 KIAA0087Q14695 138 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 PRO1854Q9UHT4 67 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 LOC400499M0QZD8 3231 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 TRBV10-2A0A0K0K1G8 114 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 LGALS3P17931 250 aaKnown RBP3.03□□□□□ -1.92
RDH11-204ENST00000553578 BRWD1-AS2P59051 145 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 RHOHQ15669 191 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 ZNF876PQ49A33 203 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 MIR17HGQ75NE6 70 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 DEFB124Q8NES8 71 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 KLF14Q8TD94 323 aaPredicted RBP3.03□□□□□ -1.92
RDH11-204ENST00000553578 IGLV7-46A0A075B6I9 117 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 NDUFA11Q86Y39 141 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 RPL36ALQ969Q0 106 aaKnown RBP3.03□□□□□ -1.92
RDH11-204ENST00000553578 BOD1L1Q8NFC6 3051 aa3.03□□□□□ -1.92
RDH11-204ENST00000553578 A0A087WW49 117 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 A0A1B0GXF2 115 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 C19orf71A6NCJ1 209 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 D6R8Y8 96 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 K7ERS5 55 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 ACYP1P07311 99 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 COX6CP09669 75 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 HIST1H4AP62805 103 aaKnown RBP3.03□□□□□ -1.93
RDH11-204ENST00000553578 FAM104BQ5XKR9 115 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 LINC01600Q96MT4 127 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 Q9H3A6 140 aa3.03□□□□□ -1.93
RDH11-204ENST00000553578 MRPL35Q9NZE8 188 aaKnown RBP3.03□□□□□ -1.93
RDH11-204ENST00000553578 IGKV3D-7A0A0C4DH55 119 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 A0A1B0GUT8 65 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 PSMB8P28062 276 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 CKS2P33552 79 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 LPAL2Q16609 132 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 SOSTDC1Q6X4U4 206 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 C11orf21Q9P2W6 132 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 LINC00474Q9P2X8 69 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 CELA1Q9UNI1 258 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 PIEZO2Q9H5I5 2752 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 TRAV12-3A0A0B4J271 114 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 KRTAP10-2P60368 255 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 RUSC1-AS1Q66K80 236 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 SDIM1Q6ZPB5 146 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 Q8N7P7 452 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGLV5-52A0A0A0MRZ9 124 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 PLAC8L1A1L4L8 177 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 M0R3E3 92 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGKV1-39P01597 117 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGKV1-5P01602 117 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGLV2-8P01709 118 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGKV1D-39P04432 117 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 IGHV4-38-2P0DP08 117 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 ORMDL3Q8N138 153 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 ZNF491Q8N8L2 437 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 DYNLRB1Q9NP97 96 aa3.02□□□□□ -1.93
RDH11-204ENST00000553578 RIF1Q5UIP0 2472 aaKnown RBP3.01□□□□□ -1.93
RDH11-204ENST00000553578 A0A0B4J2C4 111 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 TSHBP01222 138 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 CXCL5P42830 114 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 MP68P56378 58 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 C10orf25Q5T742 122 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 RBM12B-AS1Q9P1G2 102 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 DPM3Q9P2X0 92 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 ZFHX3Q15911 3703 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 TNCP24821 2201 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 TRBV19A0A075B6N1 114 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms