RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 RAB2AP61019 212 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 FLI1Q01543 452 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-219ENST00000553488 MIAQ16674 131 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 ZFP69Q49AA0 526 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 OR10G8Q8NGN5 311 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 MPLKIPQ8TAP9 179 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 SUN5Q8TC36 379 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 SPACA4Q8TDM5 124 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
ATXN3-219ENST00000553488 A0A087WYN8 130 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 TRBV6-8A0A0A6YYG3 113 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 PHOX2AO14813 284 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 SIX6O95475 246 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 ARL14EPLP0DKL9 152 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 S100A4P26447 101 aaKnown RBP4.57□□□□□ -1.68
ATXN3-219ENST00000553488 LRRC37A5PQ49AS3 106 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 DNLZQ5SXM8 178 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 FAM74A4Q5TZK3 123 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 HSD17B11Q8NBQ5 300 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 RNF185Q96GF1 192 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 SFRP2Q96HF1 295 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 HSPB11Q9Y547 144 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
ATXN3-219ENST00000553488 TRBV7-3A0A075B6L6 115 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 HMGB3O15347 200 aaKnown RBP4.56□□□□□ -1.68
ATXN3-219ENST00000553488 ATP6V1G1O75348 118 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
ATXN3-219ENST00000553488 STAG3L2P0CL84 134 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 STAG3L3P0CL85 134 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 PRR3P79522 188 aaKnown RBP4.56□□□□□ -1.68
ATXN3-219ENST00000553488 RPL36AP83881 106 aaKnown RBP4.56□□□□□ -1.68
ATXN3-219ENST00000553488 KCNIP4Q6PIL6 250 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 PRNTQ86SH4 94 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 WFDC1Q9HC57 220 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
ATXN3-219ENST00000553488 A0A1W2PPV4 95 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 B4DEV8 164 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 KRBOX1C9JBD0 128 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 K7EQM0 130 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 PTTG1O95997 202 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 ARMS2P0C7Q2 107 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 GCHFRP30047 84 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 CDC34P49427 236 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-219ENST00000553488 PRR27Q6MZM9 219 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 CLPSL2Q6UWE3 100 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 LINC00299Q6ZSB3 139 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 Q86TA4 180 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 NEXN-AS1Q8NBZ9 246 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 OR11H4Q8NGC9 324 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 SMIM3Q9BZL3 60 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 ARL2-SNX15V9GYD0 113 aa4.55□□□□□ -1.68
ATXN3-219ENST00000553488 IGHV3-64A0A075B6Q5 118 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 CRIP1P50238 77 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 H2BFSP57053 126 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 RBX1P62877 108 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 SAPCD1Q5SSQ6 148 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 PPP1R1CQ8WVI7 109 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 EPDR1Q9UM22 224 aa4.54□□□□□ -1.68
ATXN3-219ENST00000553488 hDV102S1A0JD36 115 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 GRIFINA4D1Z8 144 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 M0R036 132 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 M0R381 172 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 MPC2O95563 127 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 RPL12P30050 165 aaKnown RBP4.53□□□□□ -1.68
ATXN3-219ENST00000553488 PKIAP61925 76 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 RGS21Q2M5E4 152 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 S100ZQ8WXG8 99 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 CHCHD5Q9BSY4 110 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 DPH3P1Q9H4G8 78 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
ATXN3-219ENST00000553488 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 MUC21A0A0G2JKD1 596 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 FAM240BA0A1B0GVZ2 78 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 SH2D1AO60880 128 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 RAB4BP61018 213 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 CYCSP99999 105 aaKnown RBP4.52□□□□□ -1.69
ATXN3-219ENST00000553488 ZFP82Q8N141 532 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 C7orf33Q8WU49 177 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 PHLDA3Q9Y5J5 127 aa4.52□□□□□ -1.69
ATXN3-219ENST00000553488 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-219ENST00000553488 A0A1W2PRE2 83 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 PEX7O00628 323 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 VPREB1P12018 145 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 TPT1P13693 172 aaKnown RBP4.51□□□□□ -1.69
ATXN3-219ENST00000553488 REG3AQ06141 175 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 GAGE6Q13070 117 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 ZNF56Q15929 161 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 IQCJQ1A5X6 159 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 SPINK6Q6UWN8 80 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 C15orf56Q8N910 161 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms