RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 CNFNQ9BYD5 112 aa4.13□□□□□ -1.75
PPFIA2-226ENST00000552020 SONP18583 2426 aaKnown RBP4.13□□□□□ -1.75
PPFIA2-226ENST00000552020 DOCK10Q96BY6 2186 aa4.13□□□□□ -1.75
PPFIA2-226ENST00000552020 IGKV1OR2-108A0A075B7D4 117 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 TRAV12-1A0A0B4J245 112 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 KLRC4-KLRK1H3BQV0 150 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 DPM2O94777 84 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 BRI3O95415 125 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 FSTL3O95633 263 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 INSP01308 110 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 IGKV3-15P01624 115 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 SAA2P0DJI9 122 aaPredicted RBP4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 SLC25A16P16260 332 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 FCER1GP30273 86 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 ZNF137PP52743 207 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 CRYBA4P53673 196 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 PRR3P79522 188 aaKnown RBP4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 SMAGPQ0VAQ4 97 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 RRN3P1Q2M238 152 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 VMA21Q3ZAQ7 101 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 SPINK9Q5DT21 86 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 FAM104BQ5XKR9 115 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 ZNF833PQ6ZTB9 187 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 LINC00305Q7Z4B0 112 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 C11orf53Q8IXP5 236 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 LINC00311Q8N616 119 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 OR11H6Q8NGC7 330 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 KLF14Q8TD94 323 aaPredicted RBP4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 PPDPFLQ8WWR9 84 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 LINC01600Q96MT4 127 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 PRELID3AQ96N28 172 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 RPUSD1Q9UJJ7 312 aaKnown RBP4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 ERG28Q9UKR5 140 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 RYR3Q15413 4870 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 ARHGAP21Q5T5U3 1957 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
PPFIA2-226ENST00000552020 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 FAM240AA0A1B0GVK7 77 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 APOMO95445 188 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 IGKCP01834 107 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 Q6ZT83 130 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 MAPK1IP1LQ8NDC0 245 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 RNF5Q99942 180 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 GTSF1LQ9H1H1 148 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 TMEM133Q9H2Q1 129 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 HIGD1AQ9Y241 93 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 LINC00312Q9Y6C7 94 aa4.11□□□□□ -1.75
PPFIA2-226ENST00000552020 DYSFO75923 2080 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 ZNF407Q9C0G0 2248 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 IGLL5B9A064 214 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 PPP1R17O96001 155 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 COL8A2P25067 703 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 LOXP28300 417 aaPredicted RBP4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 RPL39P5Q59GN2 51 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 TEN1Q86WV5 123 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 C11orf72Q8NBR9 251 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 PSG8Q9UQ74 426 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 MED12LQ86YW9 2145 aa4.1□□□□□ -1.75
PPFIA2-226ENST00000552020 HRNRQ86YZ3 2850 aaPredicted RBP4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 KMT2CQ8NEZ4 4911 aaKnown RBP4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TRBV25-1A0A075B6N4 114 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 IGKV1D-37A0A075B6S9 117 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 A0A096LNJ9 63 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TRAV3A0A0B4J244 114 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 IGHV3OR16-9A0A0B4J2B5 98 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 M0R1B8 84 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 LHBP01229 141 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 IL4P05112 153 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 PYYP10082 97 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 NMUP48645 174 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 HERVK_113P61574 105 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 RBMY1FQ15415 496 aaKnown RBP4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 PATE2Q6UY27 113 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 Q6ZR03 302 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 AMN1Q8IY45 258 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 OR8A1Q8NGG7 326 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 RNF185Q96GF1 192 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TTTY12Q9BZ98 90 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 PRO0461Q9UI25 63 aa4.09□□□□□ -1.75
PPFIA2-226ENST00000552020 TRBV19A0A075B6N1 114 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 IGHV3-43A0A0B4J1X8 118 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 IGHV1-69DA0A0B4J2H0 117 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 RBAKDNA6NC62 111 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 D6R8Y8 96 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 SPINK8P0C7L1 97 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 CKS2P33552 79 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 FXYD2P54710 66 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 EDDM3AQ14507 147 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 C12orf74Q32Q52 190 aa4.08□□□□□ -1.76
PPFIA2-226ENST00000552020 TEX36Q5VZQ5 186 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms