RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 NAPSAO96009 420 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 CTSGP08311 255 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 DEFA4P12838 97 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 RPL5P46777 297 aaKnown RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 CSN1S1P47710 185 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 SERPINB10P48595 397 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 RBM11P57052 281 aaKnown RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 IL15RAQ13261 267 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 MOBPQ13875 183 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 PSMG4Q5JS54 123 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 TRIQKQ629K1 86 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 IFT20Q8IY31 132 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 STX19Q8N4C7 294 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 PACRGLQ8N7B6 248 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 OR8J3Q8NGG0 315 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 MRPL30Q8TCC3 161 aaKnown RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 GPER1Q99527 375 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 NIPSNAP1Q9BPW8 284 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 SLC35B3Q9H1N7 401 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 MRPL16Q9NX20 251 aaKnown RBP2.14□□□□□ -2.07
LIMA1-208ENST00000551691 JPT1Q9UK76 154 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 PRELID1Q9Y255 219 aa2.14□□□□□ -2.07
LIMA1-208ENST00000551691 M0R129 80 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 APOA2P02652 100 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 SAA1P0DJI8 122 aaPredicted RBP2.13□□□□□ -2.07
LIMA1-208ENST00000551691 CRHBPP24387 322 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 CRYBB3P26998 211 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 ATP5G3P48201 142 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 DEFA1P59665 94 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 RRN3P1Q2M238 152 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 TNFAIP8L3Q5GJ75 292 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 RPL13AP3Q6NVV1 102 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 SDIM1Q6ZPB5 146 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM147Q9BVK8 224 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 BANF2Q9H503 90 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 RSL24D1Q9UHA3 163 aaKnown RBP2.13□□□□□ -2.07
LIMA1-208ENST00000551691 BAIAP2Q9UQB8 552 aa2.13□□□□□ -2.07
LIMA1-208ENST00000551691 IGKV1D-37A0A075B6S9 117 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 ZNF670-ZNF695F2Z2N8 137 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 J3QRK9 145 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 CREBL2O60519 120 aaPredicted RBP2.12□□□□□ -2.07
LIMA1-208ENST00000551691 SRP19P09132 144 aaKnown RBP2.12□□□□□ -2.07
LIMA1-208ENST00000551691 SMIM11AP58511 58 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 SNRPGP62308 76 aaKnown RBP2.12□□□□□ -2.07
LIMA1-208ENST00000551691 HMGN3Q15651 99 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 IAH1Q2TAA2 248 aaPredicted RBP2.12□□□□□ -2.07
LIMA1-208ENST00000551691 KLK9Q2XQG4 91 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 VMA21Q3ZAQ7 101 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 Q56UQ5 140 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 TOMM20LQ6UXN7 152 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 GDPD1Q8N9F7 314 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 OR10P1Q8NGE3 313 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 DCANP1Q8TF63 244 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 DEDD2Q8WXF8 326 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 UQCC1Q9NVA1 299 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 TVP23BQ9NYZ1 205 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 KLK9Q9UKQ9 250 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 R4GN34 69 aa2.12□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV9-1A0A075B6T8 112 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV26-2A0A0B4J265 109 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 H3BPC8 53 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 LST1O00453 97 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 PLA2G10O15496 165 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 IGLV6-57P01721 117 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 CD5P06127 495 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 FABP1P07148 127 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 GZMBP10144 247 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 HTN1P15515 57 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 HIST1H1BP16401 226 aaKnown RBP2.11□□□□□ -2.07
LIMA1-208ENST00000551691 MPV17LQ2QL34 196 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 PRR9Q5T870 116 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM244Q5VVB8 128 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 LYPD5Q6UWN5 251 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 Q6ZS49 121 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 WFDC10BQ8IUB3 73 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 OR4B1Q8NGF8 309 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 OR4X1Q8NH49 305 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 TEX47Q8TBZ9 253 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 WDR61Q9GZS3 305 aaKnown RBP2.11□□□□□ -2.07
LIMA1-208ENST00000551691 C11orf1Q9H5F2 150 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 NOP10Q9NPE3 64 aaKnown RBP2.11□□□□□ -2.07
LIMA1-208ENST00000551691 TAS2R4Q9NYW5 299 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 GNG8Q9UK08 70 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM56-RWDD3S4R434 201 aa2.11□□□□□ -2.07
LIMA1-208ENST00000551691 NEBP20929 6669 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV2A0A0B4J234 112 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 FAM236DA0A1B0GTK5 79 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 IGLC7A0M8Q6 106 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM235A6NFC5 223 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 A8MUN3 132 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 TMEM238C9JI98 176 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 K7EIM0 57 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 HMGB3O15347 200 aaKnown RBP2.1□□□□□ -2.07
LIMA1-208ENST00000551691 SULT1C4O75897 302 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 ATG12O94817 140 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 NPYP01303 97 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms