RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 M0R036 132 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 GNRH2O43555 120 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 P01737 135 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 PRM2P04554 102 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 RNASE3P12724 160 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 HTN1P15515 57 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 TCL1AP56279 114 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 ZNF415Q09FC8 603 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 DAZ2Q13117 558 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 ADIRFQ15847 76 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 SLC7A5P1Q8MH63 180 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 C15orf54Q8N8G6 183 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 RNASE7Q9H1E1 156 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 RPP21Q9H633 154 aaKnown RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 IL36BQ9NZH7 164 aa4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 TIMM8BQ9Y5J9 83 aaPredicted RBP4.5□□□□□ -1.69
DEPDC4-210ENST00000551642 TEX48A0A1B0GUV7 120 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 XKRY2A2RUG3 117 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 SNURFLB1AK76 121 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 GATCO43716 136 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 ASIPP42127 132 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 TCTAP57738 103 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 OR2D3Q8NGH3 330 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 PTH2Q96A98 100 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 SPXQ9BT56 116 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 NDUFAF3Q9BU61 184 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
DEPDC4-210ENST00000551642 TMSB15BA0A087X1C1 80 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 FAM231BA6NCW3 169 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 A8MWL6 223 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 F2Z2F3 143 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 PPP1R2P9O14990 202 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 SNAI2O43623 268 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 SPINK4O60575 86 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 OR5AL1P0C617 328 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 ARMS2P0C7Q2 107 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 IGLC6P0CF74 106 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 LINC00612Q8N6U2 182 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 OR10G8Q8NGN5 311 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 GFRA4Q9GZZ7 299 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 V9GYV3 84 aa4.48□□□□□ -1.69
DEPDC4-210ENST00000551642 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 SMIM27A0A1W2PRY6 76 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 GRIFINA4D1Z8 144 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 IGLL5B9A064 214 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 H3BVH4 76 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 M0R2P5 195 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 DEFB4AO15263 64 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 NXPH4O95158 308 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 MT-ND4LP03901 98 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 SPART-AS1P0CW21 52 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 S100A4P26447 101 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 CTRLP40313 264 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 EMP1P54849 157 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 RNF212Q495C1 297 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 FAM222AQ5U5X8 452 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 WDR73Q6P4I2 378 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 SVBPQ8N300 66 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 POM121L12Q8N7R1 296 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 RASL10AQ92737 203 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 FRZBQ92765 325 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 CNFNQ9BYD5 112 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 NOP10Q9NPE3 64 aaKnown RBP4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 TMEM242Q9NWH2 141 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 CELA1Q9UNI1 258 aa4.47□□□□□ -1.69
DEPDC4-210ENST00000551642 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 A0A087WWC5 75 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 SNAPINO95295 136 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 APOC3P02656 99 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 GZMBP10144 247 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 RHEBQ15382 184 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 Q6ZTI0 123 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 ZFP82Q8N141 532 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 C11orf45Q8TAV5 145 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 IMMP2LQ96T52 175 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
DEPDC4-210ENST00000551642 TRGV1A0A0A0MS02 117 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 HIGD1CA8MV81 97 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 A8MWV9 139 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 CIDEAO60543 219 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 CFC1P0CG37 223 aa4.45□□□□□ -1.7
DEPDC4-210ENST00000551642 DAD1P61803 113 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms