RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RAB4BP61018 213 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 TCTE3Q8IZS6 198 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 SNAI2O43623 268 aa11.6□□□□□ -0.55
PRPF40B-215ENST00000551418 ELOBQ15370 118 aa11.6□□□□□ -0.55
PRPF40B-215ENST00000551418 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
PRPF40B-215ENST00000551418 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
PRPF40B-215ENST00000551418 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 PDE6DO43924 150 aa11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 SULT1A2P50226 295 aa11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 ZNF56Q15929 161 aa11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 DAZAP1Q96EP5 407 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 SSBP4Q9BWG4 385 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-215ENST00000551418 SMIM17P0DL12 118 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 TAGLN2P37802 199 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 RPL19P84098 196 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 MPV17L2Q567V2 206 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 SLC51BQ86UW2 128 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 C15orf54Q8N8G6 183 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 OR10AG1Q8NH19 301 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 BIN3Q9NQY0 253 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
PRPF40B-215ENST00000551418 XKRY2A2RUG3 117 aa11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 PKIAP61925 76 aa11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 AP1S3Q96PC3 154 aa11.57□□□□□ -0.56
PRPF40B-215ENST00000551418 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 OXTP01178 125 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 GNG4P50150 75 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 TMEM97Q5BJF2 176 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 C1orf43Q9BWL3 253 aa11.56□□□□□ -0.56
PRPF40B-215ENST00000551418 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
PRPF40B-215ENST00000551418 PRSS1P07477 247 aa11.55□□□□□ -0.56
PRPF40B-215ENST00000551418 CCL20P78556 96 aa11.55□□□□□ -0.56
PRPF40B-215ENST00000551418 Q0VG73 95 aa11.55□□□□□ -0.56
PRPF40B-215ENST00000551418 F5H697 171 aa11.54□□□□□ -0.56
PRPF40B-215ENST00000551418 PANO1I0J062 215 aa11.54□□□□□ -0.56
PRPF40B-215ENST00000551418 NTM-AS1Q6ZSK4 140 aa11.54□□□□□ -0.56
PRPF40B-215ENST00000551418 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
PRPF40B-215ENST00000551418 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 ANGP03950 147 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 BCL2P10415 239 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 SSTP61278 116 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 CACNG7P62955 275 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 VAX2Q9UIW0 290 aa11.53□□□□□ -0.56
PRPF40B-215ENST00000551418 H7C1H1 209 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 P01737 135 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 FER1L6-AS1Q8NA97 138 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-215ENST00000551418 F2Z2F3 143 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 CRPP02741 224 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 C14orf177Q52M58 125 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 OR2D3Q8NGH3 330 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 TPPP3Q9BW30 176 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 PLA2G2DQ9UNK4 145 aa11.51□□□□□ -0.57
PRPF40B-215ENST00000551418 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
PRPF40B-215ENST00000551418 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
PRPF40B-215ENST00000551418 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
PRPF40B-215ENST00000551418 GAGE6Q13070 117 aa11.49□□□□□ -0.57
PRPF40B-215ENST00000551418 AKAP14Q86UN6 197 aa11.49□□□□□ -0.57
PRPF40B-215ENST00000551418 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
PRPF40B-215ENST00000551418 RBX1P62877 108 aa11.48□□□□□ -0.57
PRPF40B-215ENST00000551418 Q6ZNX1 250 aa11.48□□□□□ -0.57
PRPF40B-215ENST00000551418 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
PRPF40B-215ENST00000551418 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
PRPF40B-215ENST00000551418 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
PRPF40B-215ENST00000551418 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
PRPF40B-215ENST00000551418 RAB19A4D1S5 217 aa11.47□□□□□ -0.57
PRPF40B-215ENST00000551418 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
PRPF40B-215ENST00000551418 MGPP08493 103 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 MT1HL1P0DM35 61 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 GZMBP10144 247 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 BLOC1S1P78537 153 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 MIAQ16674 131 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
PRPF40B-215ENST00000551418 TRBV20OR9-2A0A075B6H5 130 aa11.44□□□□□ -0.58
PRPF40B-215ENST00000551418 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
PRPF40B-215ENST00000551418 C9orf62Q8N4C0 152 aa11.44□□□□□ -0.58
PRPF40B-215ENST00000551418 DPH3P1Q9H4G8 78 aa11.44□□□□□ -0.58
PRPF40B-215ENST00000551418 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
PRPF40B-215ENST00000551418 M0QY20 66 aa11.43□□□□□ -0.58
PRPF40B-215ENST00000551418 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
PRPF40B-215ENST00000551418 GFRA4Q9GZZ7 299 aa11.43□□□□□ -0.58
PRPF40B-215ENST00000551418 TMEM250H0YL14 139 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms