RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 LYSTQ99698 3801 aa9.36□□□□□ -0.91
ERBB3-215ENST00000550828 KLK5Q9Y337 293 aaPredicted RBP9.36□□□□□ -0.91
ERBB3-215ENST00000550828 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
ERBB3-215ENST00000550828 NCR2O95944 276 aa9.35□□□□□ -0.91
ERBB3-215ENST00000550828 RPS10P46783 165 aaKnown RBP9.35□□□□□ -0.91
ERBB3-215ENST00000550828 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
ERBB3-215ENST00000550828 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
ERBB3-215ENST00000550828 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
ERBB3-215ENST00000550828 GAGE12JA6NER3 117 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 NUDT3O95989 172 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 GAGE1Q13065 139 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 GAGE4Q13068 117 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 GAGE5Q13069 117 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 GAGE13Q4V321 117 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 RASL11AQ6T310 242 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
ERBB3-215ENST00000550828 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
ERBB3-215ENST00000550828 S100A8P05109 93 aa9.33□□□□□ -0.92
ERBB3-215ENST00000550828 NRACQ8N912 160 aa9.33□□□□□ -0.92
ERBB3-215ENST00000550828 DNAH6Q9C0G6 4158 aa9.32□□□□□ -0.92
ERBB3-215ENST00000550828 S100A1P23297 94 aa9.32□□□□□ -0.92
ERBB3-215ENST00000550828 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
ERBB3-215ENST00000550828 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
ERBB3-215ENST00000550828 UBE2D3P61077 147 aa9.31□□□□□ -0.92
ERBB3-215ENST00000550828 UBE2D2P62837 147 aa9.31□□□□□ -0.92
ERBB3-215ENST00000550828 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
ERBB3-215ENST00000550828 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 COLCA2A8K830 154 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 D6R8Y8 96 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 H7C1H1 209 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 SRIP30626 198 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 TCTAP57738 103 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 ESRGQ1W209 222 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 KIAA1644Q3SXP7 199 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 FRZBQ92765 325 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
ERBB3-215ENST00000550828 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 NPYP01303 97 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
ERBB3-215ENST00000550828 NEGR1Q7Z3B1 354 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
ERBB3-215ENST00000550828 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
ERBB3-215ENST00000550828 CKS2P33552 79 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 OR10J3Q5JRS4 329 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
ERBB3-215ENST00000550828 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
ERBB3-215ENST00000550828 APCSP02743 223 aa9.27□□□□□ -0.93
ERBB3-215ENST00000550828 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
ERBB3-215ENST00000550828 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.93
ERBB3-215ENST00000550828 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 MT-ND6P03923 174 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
ERBB3-215ENST00000550828 TIRAPP58753 221 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 COX19Q49B96 90 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 PRELID3AQ96N28 172 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 TMEM70Q9BUB7 260 aa9.26□□□□□ -0.93
ERBB3-215ENST00000550828 PHOX2AO14813 284 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 PPBPP02775 128 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 GTSF1LQ9H1H1 148 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 MRPS16Q9Y3D3 137 aaKnown RBP9.25□□□□□ -0.93
ERBB3-215ENST00000550828 TRAPPC1Q9Y5R8 145 aa9.25□□□□□ -0.93
ERBB3-215ENST00000550828 KMT2AQ03164 3969 aa9.24□□□□□ -0.93
ERBB3-215ENST00000550828 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
ERBB3-215ENST00000550828 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
ERBB3-215ENST00000550828 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
ERBB3-215ENST00000550828 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
ERBB3-215ENST00000550828 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
ERBB3-215ENST00000550828 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
ERBB3-215ENST00000550828 IGLV2-18A0A075B6J9 118 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 TSHBP01222 138 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 RAB5AP20339 215 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 LGALS9CQ6DKI2 356 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 Q8N3U1 123 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 HYDINQ4G0P3 5121 aa9.23□□□□□ -0.93
ERBB3-215ENST00000550828 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 CCL18P55774 89 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 RPL32P62910 135 aaKnown RBP9.22□□□□□ -0.93
ERBB3-215ENST00000550828 LELP1Q5T871 98 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 C20orf78Q9BR46 151 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
ERBB3-215ENST00000550828 PRSS47A8MTI9 375 aa9.21□□□□□ -0.94
ERBB3-215ENST00000550828 PPP1R17O96001 155 aa9.21□□□□□ -0.94
ERBB3-215ENST00000550828 TRGC2P03986 189 aa9.21□□□□□ -0.94
ERBB3-215ENST00000550828 LAMTOR2Q9Y2Q5 125 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms