RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SRSF9Q13242 221 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCDC59-204ENST00000550589 NSUN5P1Q3KNT7 163 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 Q6ZQT7 251 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 DUX3Q96PT4 197 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 LINC00467Q9BRT7 94 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 ZNF256Q9Y2P7 627 aaPredicted RBP3.22□□□□□ -1.89
CCDC59-204ENST00000550589 TNFRSF18Q9Y5U5 241 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 SPG11Q96JI7 2443 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 ACACBO00763 2458 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 C11orf86A6NJI1 115 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 H3BMM0 161 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 J3QR89 54 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 M0QY20 66 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 INSP01308 110 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 TCTAP57738 103 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 LINC00315P59091 139 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 DEFB1P60022 68 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 STHQ8IWL8 128 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 KLHL30-AS1Q8NEE0 82 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 DNAJC30Q96LL9 226 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 LINC01587Q99440 93 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 VCX2Q9H322 139 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 MDFICQ9P1T7 246 aa3.22□□□□□ -1.89
CCDC59-204ENST00000550589 CSMD1Q96PZ7 3565 aa3.21□□□□□ -1.89
CCDC59-204ENST00000550589 A0A1W2PPM0 123 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 IGIPA6NJ69 53 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 ZNF815PA8K554 130 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 A8MTW9 85 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 CIDEAO60543 219 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 CRYGDP07320 174 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 HTN1P15515 57 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 LGALS3P17931 250 aaKnown RBP3.21□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM170BQ5T4T1 132 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 C10orf99Q6UWK7 81 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 CST9LQ9H4G1 147 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 SPCS1Q9Y6A9 102 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 COL12A1Q99715 3063 aa3.21□□□□□ -1.9
CCDC59-204ENST00000550589 IGKV2D-26A0A0A0MRZ7 120 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 K7EP34 96 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 SLPIP03973 132 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 DEFB114Q30KQ6 69 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 AMTNQ6UX39 209 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 ZNF418Q8TF45 676 aaPredicted RBP3.2□□□□□ -1.9
CCDC59-204ENST00000550589 RAB37Q96AX2 223 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 BBC3Q96PG8 261 aaPredicted RBP3.2□□□□□ -1.9
CCDC59-204ENST00000550589 PRADC1Q9BSG0 188 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 C1QTNF4Q9BXJ3 329 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
CCDC59-204ENST00000550589 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 TSSC4Q9Y5U2 329 aaPredicted RBP3.2□□□□□ -1.9
CCDC59-204ENST00000550589 DCHS2Q6V1P9 2916 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 F8W1H4 67 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 CCL24O00175 119 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM61Q8N0U2 210 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 DLX4Q92988 240 aaPredicted RBP3.2□□□□□ -1.9
CCDC59-204ENST00000550589 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 ZNF479Q96JC4 524 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 MAP6D1Q9H9H5 199 aa3.2□□□□□ -1.9
CCDC59-204ENST00000550589 ITPR1Q14643 2758 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 KNCNA6PVL3 124 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 SPRY2O43597 315 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 EDN2P20800 178 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 FXYD2P54710 66 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 COTL1Q14019 142 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 CD300EQ496F6 205 aaPredicted RBP3.19□□□□□ -1.9
CCDC59-204ENST00000550589 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 DGAT2L7PQ6IED9 249 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 Q6ZSV7 163 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 Q6ZVH6 145 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 FAM110AQ9BQ89 295 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 JPT2Q9H910 190 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
CCDC59-204ENST00000550589 SPANXA1Q9NS26 97 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 TP73-AS1Q9UF72 201 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 MYO18BQ8IUG5 2567 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 ABCA2Q9BZC7 2435 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 DNAJC9-AS1A6NH13 148 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 TMEM238C9JI98 176 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 J3QQQ9 107 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
CCDC59-204ENST00000550589 KRTAP10-9P60411 292 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
CCDC59-204ENST00000550589 DEFB136Q30KP8 78 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 C12orf74Q32Q52 190 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 VPS25Q9BRG1 176 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 C16orf95Q9H693 158 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 MRPL16Q9NX20 251 aaKnown RBP3.19□□□□□ -1.9
CCDC59-204ENST00000550589 SELENOKQ9Y6D0 94 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 CSPG4Q6UVK1 2322 aa3.19□□□□□ -1.9
CCDC59-204ENST00000550589 FAM208BQ5VWN6 2430 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 NAV2Q8IVL1 2488 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 TRBV20-1A0A075B6N2 111 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.18□□□□□ -1.9
CCDC59-204ENST00000550589 TRBV10-1A0A0K0K1A3 114 aa3.18□□□□□ -1.9
CCDC59-204ENST00000550589 J3QKU1 62 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms