RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 UBE2D3P61077 147 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 UBE2G1P62253 170 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 UBE2D2P62837 147 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 RPL36AP83881 106 aaKnown RBP4.98□□□□□ -1.61
NEK3-201ENST00000550331 Q0VG73 95 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 ZNF674Q2M3X9 581 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 LINC01620Q4KN68 170 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 Q5BKY6 102 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 AKR1C8PQ5T2L2 129 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 OR10G8Q8NGN5 311 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 RPL36ALQ969Q0 106 aaKnown RBP4.98□□□□□ -1.61
NEK3-201ENST00000550331 UBE2WQ96B02 151 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 FMC1Q96HJ9 113 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 M0R381 172 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 LTAP01374 205 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 FHITP49789 147 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
NEK3-201ENST00000550331 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 CIRBP-AS1Q8TBR5 109 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 DNAJC30Q96LL9 226 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 C1orf43Q9BWL3 253 aa4.97□□□□□ -1.61
NEK3-201ENST00000550331 LRP2P98164 4655 aa4.96□□□□□ -1.61
NEK3-201ENST00000550331 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 TMSB15BA0A087X1C1 80 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 TRBV6-8A0A0A6YYG3 113 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 MAP1LC3B2A6NCE7 125 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 OXTP01178 125 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 IGLV2-8P01709 118 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 CRPP02741 224 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 CXCL1P09341 107 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 RAB4BP61018 213 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 PKIAP61925 76 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 STOML3Q8TAV4 291 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 MAP1LC3BQ9GZQ8 125 aa4.96□□□□□ -1.62
NEK3-201ENST00000550331 TMEM262E9PQX1 116 aa4.95□□□□□ -1.62
NEK3-201ENST00000550331 AKR1C3P42330 323 aa4.95□□□□□ -1.62
NEK3-201ENST00000550331 PRR27Q6MZM9 219 aa4.95□□□□□ -1.62
NEK3-201ENST00000550331 ENHOQ6UWT2 76 aa4.95□□□□□ -1.62
NEK3-201ENST00000550331 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.95□□□□□ -1.62
NEK3-201ENST00000550331 ZNF561-AS1K7EIQ3 104 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 S100A9P06702 114 aaKnown RBP4.94□□□□□ -1.62
NEK3-201ENST00000550331 ZNF56Q15929 161 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 MIAQ16674 131 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 MPV17L2Q567V2 206 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 TMEM97Q5BJF2 176 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 CST9LP1Q5W188 147 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 NEXN-AS1Q8NBZ9 246 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 CYTL1Q9NRR1 136 aa4.94□□□□□ -1.62
NEK3-201ENST00000550331 USP17L23D6RBM5 183 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 G3V3Q6 166 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 ARPC5O15511 151 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 SNAI2O43623 268 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 HLA-DQA1P01909 254 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 ANGP03950 147 aaKnown RBP4.93□□□□□ -1.62
NEK3-201ENST00000550331 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 C15orf54Q8N8G6 183 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 OR10AG1Q8NH19 301 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 MLST8Q9BVC4 326 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 ZNF471Q9BX82 626 aaPredicted RBP4.93□□□□□ -1.62
NEK3-201ENST00000550331 BATF3Q9NR55 127 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 VAX2Q9UIW0 290 aa4.93□□□□□ -1.62
NEK3-201ENST00000550331 TNXBP22105 4242 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 UMAD1C9J7I0 102 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 PAGE4O60829 102 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 PFDN1O60925 122 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 RPL37AP61513 92 aaKnown RBP4.92□□□□□ -1.62
NEK3-201ENST00000550331 RPL19P84098 196 aaKnown RBP4.92□□□□□ -1.62
NEK3-201ENST00000550331 SPANXN1Q5VSR9 72 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 BAGE2Q86Y30 109 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
NEK3-201ENST00000550331 TRBV25-1A0A075B6N4 114 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 F5H697 171 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 PRSS1P07477 247 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 SMIM17P0DL12 118 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 RBX1P62877 108 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 ZNF345Q14585 488 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 MBD3L1Q8WWY6 194 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 AP1S3Q96PC3 154 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 DERL1Q9BUN8 251 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 KIF25-AS1Q9Y6Z4 181 aa4.91□□□□□ -1.62
NEK3-201ENST00000550331 H7C1H1 209 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 IQCJQ1A5X6 159 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 KCNRGQ8N5I3 272 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 FAM213BQ8TBF2 198 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 SFT2D1Q8WV19 159 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 CDIP1Q9H305 208 aa4.9□□□□□ -1.63
NEK3-201ENST00000550331 MUC21A0A0G2JKD1 596 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 MUC21A0A140T8X8 626 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 CNBPP62633 177 aaKnown RBP4.89□□□□□ -1.63
NEK3-201ENST00000550331 REG3AQ06141 175 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 GAGE6Q13070 117 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 CLPSL2Q6UWE3 100 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 TMUB2Q71RG4 321 aa4.89□□□□□ -1.63
NEK3-201ENST00000550331 LINC00269Q8N2A0 174 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms