RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 AP1S3Q96PC3 154 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 SMCO4Q9NRQ5 59 aa9.23□□□□□ -0.93
NUP188-211ENST00000550219 CDK2AP2O75956 126 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 EVI2AP22794 236 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 HBBP68871 147 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 FHL2Q14192 279 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 ELOBQ15370 118 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
NUP188-211ENST00000550219 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 A0A087WWL8 130 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 RHODO00212 210 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
NUP188-211ENST00000550219 RASL11AQ6T310 242 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.94
NUP188-211ENST00000550219 TMEM191AQ9H0A3 160 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
NUP188-211ENST00000550219 HSPG2P98160 4391 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 PAX4O43316 350 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 S100A8P05109 93 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 GATA1P15976 413 aaPredicted RBP9.2□□□□□ -0.94
NUP188-211ENST00000550219 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 CBLN2Q8IUK8 224 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 DPH3P1Q9H4G8 78 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 RYR1P21817 5038 aa9.2□□□□□ -0.94
NUP188-211ENST00000550219 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
NUP188-211ENST00000550219 CAMPP49913 170 aa9.19□□□□□ -0.94
NUP188-211ENST00000550219 SLAQ13239 276 aa9.19□□□□□ -0.94
NUP188-211ENST00000550219 Q6ZSN1 163 aa9.19□□□□□ -0.94
NUP188-211ENST00000550219 SMIM15Q7Z3B0 74 aa9.19□□□□□ -0.94
NUP188-211ENST00000550219 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 SIVA1O15304 175 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 RAB4BP61018 213 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
NUP188-211ENST00000550219 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 TRBV6-4A0A1B0GX49 114 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 SCO1O75880 301 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 CRYBA4P53673 196 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 FRZBQ92765 325 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
NUP188-211ENST00000550219 ABCA13Q86UQ4 5058 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 BTF3P20290 206 aaKnown RBP9.16□□□□□ -0.94
NUP188-211ENST00000550219 RAB4AP20338 218 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
NUP188-211ENST00000550219 COX19Q49B96 90 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 GNB1LQ9BYB4 327 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 LRP1BQ9NZR2 4599 aa9.16□□□□□ -0.94
NUP188-211ENST00000550219 COLCA2A8K830 154 aa9.15□□□□□ -0.94
NUP188-211ENST00000550219 M0QY20 66 aa9.15□□□□□ -0.94
NUP188-211ENST00000550219 MGPP08493 103 aa9.15□□□□□ -0.94
NUP188-211ENST00000550219 ZNF56Q15929 161 aa9.15□□□□□ -0.94
NUP188-211ENST00000550219 SUMO4Q6EEV6 95 aa9.15□□□□□ -0.94
NUP188-211ENST00000550219 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 F5H697 171 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 K7EQD1 137 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 RHOHQ15669 191 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 MRPL23Q16540 153 aaKnown RBP9.14□□□□□ -0.95
NUP188-211ENST00000550219 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
NUP188-211ENST00000550219 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
NUP188-211ENST00000550219 Q8N1X5 172 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 TNFRSF18Q9Y5U5 241 aa9.14□□□□□ -0.95
NUP188-211ENST00000550219 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 MT-ND6P03923 174 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 SRIP30626 198 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 NEGR1Q7Z3B1 354 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 Q9UF83 564 aa9.13□□□□□ -0.95
NUP188-211ENST00000550219 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 H7C1H1 209 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 EREGO14944 169 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 DNAH10OSP0CZ25 163 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 GYPEP15421 78 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 WFDC10BQ8IUB3 73 aa9.12□□□□□ -0.95
NUP188-211ENST00000550219 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
NUP188-211ENST00000550219 GAS8-AS1O95177 125 aa9.11□□□□□ -0.95
NUP188-211ENST00000550219 PPBPP02775 128 aa9.11□□□□□ -0.95
NUP188-211ENST00000550219 NEXN-AS1Q8NBZ9 246 aa9.11□□□□□ -0.95
NUP188-211ENST00000550219 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
NUP188-211ENST00000550219 TRBV6-5A0A0K0K1A5 114 aa9.1□□□□□ -0.95
NUP188-211ENST00000550219 APCSP02743 223 aa9.1□□□□□ -0.95
NUP188-211ENST00000550219 NRACQ8N912 160 aa9.1□□□□□ -0.95
NUP188-211ENST00000550219 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
NUP188-211ENST00000550219 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
NUP188-211ENST00000550219 NIT2Q9NQR4 276 aa9.1□□□□□ -0.95
NUP188-211ENST00000550219 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 TRAV9-2A0A087WT02 112 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 PPP1R17O96001 155 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 RAB5AP20339 215 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 CKS2P33552 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms