RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TRBV6-1A0A0K0K1D8 114 aa6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 HLA-DQA1P01909 254 aa6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 TMEM97Q5BJF2 176 aa6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 RNF185Q96GF1 192 aa6.28□□□□□ -1.4
TRAFD1-207ENST00000550051 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 PTTG1O95997 202 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 ZNF726P1Q15940 193 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 FMC1Q96HJ9 113 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 VAX2Q9UIW0 290 aa6.27□□□□□ -1.41
TRAFD1-207ENST00000550051 CTXND1A0A1B0GTU2 59 aa6.26□□□□□ -1.41
TRAFD1-207ENST00000550051 UBE2G2P60604 165 aa6.26□□□□□ -1.41
TRAFD1-207ENST00000550051 RBX1P62877 108 aa6.26□□□□□ -1.41
TRAFD1-207ENST00000550051 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
TRAFD1-207ENST00000550051 TMSB15BA0A087X1C1 80 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 LTAP01374 205 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 CXCL1P09341 107 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 FHITP49789 147 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 XP32Q5T750 250 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 DPH3Q96FX2 82 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 TCEAL7Q9BRU2 100 aa6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 ZNF471Q9BX82 626 aaPredicted RBP6.25□□□□□ -1.41
TRAFD1-207ENST00000550051 IGHV3-64A0A075B6Q5 118 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 A0A087WYN8 130 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 TRAV8-4A0A0B4J246 113 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 P01737 135 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 SLPIP03973 132 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 GZMBP10144 247 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 DEFA1P59665 94 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 DEFA3P59666 94 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 UBE2G1P62253 170 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 ZNF56Q15929 161 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 DERL1Q9BUN8 251 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
TRAFD1-207ENST00000550051 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 BORCS7-ASMTA0A0B4J1R7 106 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 SNAI2O43623 268 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 OR5AL1P0C617 328 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 REG3AQ06141 175 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 GAGE6Q13070 117 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 RPL7L1Q6DKI1 246 aaKnown RBP6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 OR10AG1Q8NH19 301 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
TRAFD1-207ENST00000550051 F5H697 171 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 S100A9P06702 114 aaKnown RBP6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 Q5BKY6 102 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 INO80EQ8NBZ0 244 aaPredicted RBP6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 MLST8Q9BVC4 326 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 TNXBP22105 4242 aa6.22□□□□□ -1.41
TRAFD1-207ENST00000550051 IGHV1-24A0A0C4DH33 117 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 CHTF8P0CG12 524 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 AKR1C8PQ5T2L2 129 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 ALG5Q9Y673 324 aa6.21□□□□□ -1.42
TRAFD1-207ENST00000550051 LRP2P98164 4655 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 IGLV10-54A0A075B6I4 117 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 M0QY20 66 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 PHOX2AO14813 284 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 SMIM17P0DL12 118 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 KRTAP10-8P60410 259 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 CST9LP1Q5W188 147 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 STOML3Q8TAV4 291 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
TRAFD1-207ENST00000550051 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 AKR1C3P42330 323 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 MED28Q9H204 178 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
TRAFD1-207ENST00000550051 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 H7C1H1 209 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 PAGE4O60829 102 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 GIPP09681 153 aaPredicted RBP6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 BAGE2Q86Y30 109 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
TRAFD1-207ENST00000550051 NDUFS6O75380 124 aaKnown RBP6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 RPS10P46783 165 aaKnown RBP6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 RAB5CP51148 216 aa6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 SSTP61278 116 aa6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 COX6A2Q02221 97 aa6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 WDR73Q6P4I2 378 aa6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 PGLYRP4Q96LB8 373 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms