RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RBX1P62877 108 aa9.88□□□□□ -0.83
RAB5C-205ENST00000550013 GAGE6Q13070 117 aa9.88□□□□□ -0.83
RAB5C-205ENST00000550013 LINC00269Q8N2A0 174 aa9.88□□□□□ -0.83
RAB5C-205ENST00000550013 ZNF471Q9BX82 626 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-205ENST00000550013 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
RAB5C-205ENST00000550013 F5H697 171 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 SSTP61278 116 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 PKIAP61925 76 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
RAB5C-205ENST00000550013 SNAI2O43623 268 aa9.86□□□□□ -0.83
RAB5C-205ENST00000550013 PAGE4O60829 102 aa9.86□□□□□ -0.83
RAB5C-205ENST00000550013 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.86□□□□□ -0.83
RAB5C-205ENST00000550013 VAX2Q9UIW0 290 aa9.86□□□□□ -0.83
RAB5C-205ENST00000550013 CXCL1P09341 107 aa9.85□□□□□ -0.83
RAB5C-205ENST00000550013 SPANXN1Q5VSR9 72 aa9.85□□□□□ -0.83
RAB5C-205ENST00000550013 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
RAB5C-205ENST00000550013 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
RAB5C-205ENST00000550013 CYTL1Q9NRR1 136 aa9.85□□□□□ -0.83
RAB5C-205ENST00000550013 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
RAB5C-205ENST00000550013 SCO2A0A1W2PP80 73 aa9.84□□□□□ -0.83
RAB5C-205ENST00000550013 G3V3Q6 166 aa9.84□□□□□ -0.83
RAB5C-205ENST00000550013 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
RAB5C-205ENST00000550013 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
RAB5C-205ENST00000550013 TRBV25-1A0A075B6N4 114 aa9.83□□□□□ -0.84
RAB5C-205ENST00000550013 OR5AL1P0C617 328 aa9.83□□□□□ -0.84
RAB5C-205ENST00000550013 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
RAB5C-205ENST00000550013 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
RAB5C-205ENST00000550013 TNXBP22105 4242 aa9.82□□□□□ -0.84
RAB5C-205ENST00000550013 A0A1B0GV50 99 aa9.82□□□□□ -0.84
RAB5C-205ENST00000550013 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
RAB5C-205ENST00000550013 IQCJQ1A5X6 159 aa9.82□□□□□ -0.84
RAB5C-205ENST00000550013 CLRN3Q8NCR9 226 aa9.82□□□□□ -0.84
RAB5C-205ENST00000550013 A0A0D9SG52 128 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 hDV102S1A0JD36 115 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 ARPC5O15511 151 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
RAB5C-205ENST00000550013 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 CNBPP62633 177 aaKnown RBP9.81□□□□□ -0.84
RAB5C-205ENST00000550013 REG3AQ06141 175 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 Q6ZRU5 148 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 AP1S3Q96PC3 154 aa9.81□□□□□ -0.84
RAB5C-205ENST00000550013 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
RAB5C-205ENST00000550013 SLPIP03973 132 aa9.8□□□□□ -0.84
RAB5C-205ENST00000550013 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
RAB5C-205ENST00000550013 SFT2D1Q8WV19 159 aa9.8□□□□□ -0.84
RAB5C-205ENST00000550013 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
RAB5C-205ENST00000550013 LRP2P98164 4655 aa9.79□□□□□ -0.84
RAB5C-205ENST00000550013 M0QY20 66 aa9.79□□□□□ -0.84
RAB5C-205ENST00000550013 MGPP08493 103 aa9.79□□□□□ -0.84
RAB5C-205ENST00000550013 RAB5CP51148 216 aa9.79□□□□□ -0.84
RAB5C-205ENST00000550013 FAM213BQ8TBF2 198 aa9.79□□□□□ -0.84
RAB5C-205ENST00000550013 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 A0A087WYN8 130 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 PFDN1O60925 122 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 GZMBP10144 247 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 MBD3L1Q8WWY6 194 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 DPH3Q96FX2 82 aa9.78□□□□□ -0.84
RAB5C-205ENST00000550013 TMUB2Q71RG4 321 aa9.77□□□□□ -0.85
RAB5C-205ENST00000550013 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.85
RAB5C-205ENST00000550013 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
RAB5C-205ENST00000550013 RNF213Q63HN8 5207 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 TRAV8-4A0A0B4J246 113 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 P01737 135 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 NKX2-5P52952 324 aaPredicted RBP9.76□□□□□ -0.85
RAB5C-205ENST00000550013 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 AP5S1Q9NUS5 200 aa9.76□□□□□ -0.85
RAB5C-205ENST00000550013 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
RAB5C-205ENST00000550013 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
RAB5C-205ENST00000550013 RPL35P42766 123 aaKnown RBP9.75□□□□□ -0.85
RAB5C-205ENST00000550013 KCNRGQ8N5I3 272 aa9.75□□□□□ -0.85
RAB5C-205ENST00000550013 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
RAB5C-205ENST00000550013 H7C1H1 209 aa9.74□□□□□ -0.85
RAB5C-205ENST00000550013 PHOX2AO14813 284 aa9.74□□□□□ -0.85
RAB5C-205ENST00000550013 FER1L6-AS1Q8NA97 138 aa9.74□□□□□ -0.85
RAB5C-205ENST00000550013 UMAD1C9J7I0 102 aa9.73□□□□□ -0.85
RAB5C-205ENST00000550013 RASL11AQ6T310 242 aa9.73□□□□□ -0.85
RAB5C-205ENST00000550013 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
RAB5C-205ENST00000550013 OR2D3Q8NGH3 330 aa9.73□□□□□ -0.85
RAB5C-205ENST00000550013 PLAC8Q9NZF1 115 aa9.73□□□□□ -0.85
RAB5C-205ENST00000550013 GAGE12HA6NDE8 117 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 SULT1A2P50226 295 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 CACNG7P62955 275 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 CCL20P78556 96 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 COX6A2Q02221 97 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 ODF1Q14990 250 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 CENPWQ5EE01 88 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 WDR73Q6P4I2 378 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 C11orf52Q96A22 123 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 PGLYRP4Q96LB8 373 aa9.71□□□□□ -0.86
RAB5C-205ENST00000550013 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
RAB5C-205ENST00000550013 C19orf71A6NCJ1 209 aa9.7□□□□□ -0.86
RAB5C-205ENST00000550013 UBE2L6O14933 153 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms