RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 KIF25-AS1Q9Y6Z4 181 aa6.89□□□□□ -1.31
SMARCD1-206ENST00000549274 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
SMARCD1-206ENST00000549274 ELOBQ15370 118 aa6.88□□□□□ -1.31
SMARCD1-206ENST00000549274 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
SMARCD1-206ENST00000549274 TGP01266 2768 aa6.88□□□□□ -1.31
SMARCD1-206ENST00000549274 PHOX2AO14813 284 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 TCAPO15273 167 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 RAB4AP20338 218 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 SLC25A29Q8N8R3 303 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 SAMD10Q9BYL1 202 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 JPT2Q9H910 190 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
SMARCD1-206ENST00000549274 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 IGHV3-73A0A0B4J1V6 119 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 IGLL5B9A064 214 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 HOXA5P20719 270 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 SRIP30626 198 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 CKS2P33552 79 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 LINC00315P59091 139 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 TMEM88Q6PEY1 159 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
SMARCD1-206ENST00000549274 M0QY20 66 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 APCSP02743 223 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 GYPEP15421 78 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 TMEM136Q6ZRR5 245 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 NEGR1Q7Z3B1 354 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 CBLN2Q8IUK8 224 aa6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
SMARCD1-206ENST00000549274 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 TIRAPP58753 221 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 PKIAP61925 76 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 RNF185Q96GF1 192 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 ST20Q9HBF5 79 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 TRAPPC1Q9Y5R8 145 aa6.84□□□□□ -1.31
SMARCD1-206ENST00000549274 TGIF2-C20orf24A0A0A6YYL0 155 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 A0A0J9YY99 117 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 NUDT3O95989 172 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 P0DMU3 169 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 CCL18P55774 89 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 FABP9Q0Z7S8 132 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 NEXN-AS1Q8NBZ9 246 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 ATP6V0E2Q8NHE4 81 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 MRPL18Q9H0U6 180 aaKnown RBP6.83□□□□□ -1.32
SMARCD1-206ENST00000549274 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 D6R8Y8 96 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 K7EMI3 77 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 NCR2O95944 276 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 G0S2P27469 103 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 UBE2D3P61077 147 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 UBE2D2P62837 147 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 SMAGPQ0VAQ4 97 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 ZNRF2Q8NHG8 242 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 GTSF1LQ9H1H1 148 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 MAP1LC3AQ9H492 121 aa6.82□□□□□ -1.32
SMARCD1-206ENST00000549274 A0A096LPF7 62 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 VCYO14598 125 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 RAB5AP20339 215 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 PMCHP20382 165 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 GAGE1Q13065 139 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 GAGE4Q13068 117 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 GAGE5Q13069 117 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 COTL1Q14019 142 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 Q6ZSN1 163 aa6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 NXT2Q9NPJ8 142 aaKnown RBP6.81□□□□□ -1.32
SMARCD1-206ENST00000549274 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 LINC01549A6NIU2 74 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 I3L3M4 83 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 RAB5BP61020 215 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 ZFAND6Q6FIF0 208 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 APLNQ9ULZ1 77 aa6.8□□□□□ -1.32
SMARCD1-206ENST00000549274 TRBV25-1A0A075B6N4 114 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 COLCA2A8K830 154 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 K7EP13 123 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms