RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
SMARCD1-205ENST00000548573 TMEM89A2RUT3 159 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 M0R2P5 195 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 SLC25A20O43772 301 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 MT-ATP8P03928 68 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 MUSTN1Q8IVN3 82 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 SPTA1P02549 2419 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 ZFHX3Q15911 3703 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 TRGV11A0A075B6L2 103 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 TRAV2A0A0B4J234 112 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 MSMBP08118 114 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 RAX2Q96IS3 184 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 LINC01600Q96MT4 127 aa7.29□□□□□ -1.24
SMARCD1-205ENST00000548573 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 IGKV3-20P01619 116 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 SPINK13Q1W4C9 94 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 GEMIN7Q9H840 131 aaKnown RBP7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 C9JAW5 83 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 TGFAP01135 160 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 CCL19Q99731 98 aa7.28□□□□□ -1.24
SMARCD1-205ENST00000548573 IGHV3-64A0A075B6Q5 118 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 IGHV4-30-2A0A087WSY4 118 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 IGHV3-30-3P0DP02 117 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 LY6DQ14210 128 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 TMEM95Q3KNT9 176 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 CD28P10747 220 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 LITAFQ99732 161 aa7.26□□□□□ -1.25
SMARCD1-205ENST00000548573 B4DSR2 109 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 AVPP01185 164 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 GATA3P23771 443 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 ATP5J2P56134 94 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 Q1RN00 199 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 SPXQ9BT56 116 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 SPANXDQ9BXN6 97 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 SPANXCQ9NY87 97 aa7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 SPTBN1Q01082 2364 aaKnown RBP7.25□□□□□ -1.25
SMARCD1-205ENST00000548573 IGHV1-58A0A0C4DH39 117 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 H7C2G1 150 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 GNLYP22749 145 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 NBASA2RRP1 2371 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 TRAV26-1A0A087WT03 109 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 SYNJ2BPP57105 145 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 PIK3CD-AS1Q5SR53 167 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 C10orf99Q6UWK7 81 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 HIVEP3Q5T1R4 2406 aa7.24□□□□□ -1.25
SMARCD1-205ENST00000548573 TRBV10-2A0A0K0K1G8 114 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 IGHV4-59P01825 116 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 ZFAND6Q6FIF0 208 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 RNF183Q96D59 192 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 ELANEP08246 267 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 RBMY1A1P0DJD3 496 aaKnown RBP7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 RBMY1CP0DJD4 496 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 RBMY1FQ15415 496 aaKnown RBP7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 CITED1Q99966 193 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 SPANXA1Q9NS26 97 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 TNFRSF18Q9Y5U5 241 aa7.23□□□□□ -1.25
SMARCD1-205ENST00000548573 TRAV8-3A0A0A6YYJ7 113 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 A8MTW9 85 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 TRIAP1O43715 76 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 DEFB112Q30KQ8 113 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 Q5PR19 223 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 TEX29Q8N6K0 151 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 ATRXP46100 2492 aa7.22□□□□□ -1.25
SMARCD1-205ENST00000548573 COL6A6A6NMZ7 2263 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 PROK1P58294 105 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 MIAQ16674 131 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 CHCHD7Q9BUK0 85 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 PRORYQ9H606 182 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.25
SMARCD1-205ENST00000548573 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 TIMM17BO60830 172 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 PRSS2P07478 247 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 COX6CP09669 75 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 ADAMTSL4-AS1Q5T5F5 129 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 UBE2E2Q96LR5 201 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 YAE1D1Q9NRH1 226 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 ICOSQ9Y6W8 199 aa7.21□□□□□ -1.26
SMARCD1-205ENST00000548573 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 DSCR9P59020 149 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 CELSR1Q9NYQ6 3014 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 IGF2RP11717 2491 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 H3BT86 120 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms