RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MUC21A0A0G2JKD1 596 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 TRBV10-1A0A0K0K1A3 114 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 MUC21A0A140T8X8 626 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 SSTP61278 116 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 CCL20P78556 96 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 CLPSL2Q6UWE3 100 aa7.72□□□□□ -1.17
TRAFD1-205ENST00000548277 TRBV7-3A0A075B6L6 115 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 PRSS1P07477 247 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 CXCL1P09341 107 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 UBE2D3P61077 147 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 UBE2D2P62837 147 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 MPV17L2Q567V2 206 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 ATRAIDQ6UW56 229 aa7.71□□□□□ -1.18
TRAFD1-205ENST00000548277 PANO1I0J062 215 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 SNAI2O43623 268 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 RPL35P42766 123 aaKnown RBP7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 RAB4BP61018 213 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 ZNF56Q15929 161 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 SPANXN1Q5VSR9 72 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 NEXN-AS1Q8NBZ9 246 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 DPH3Q96FX2 82 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 CHCHD5Q9BSY4 110 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 DERL1Q9BUN8 251 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 GNG13Q9P2W3 67 aa7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
TRAFD1-205ENST00000548277 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 F5H697 171 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 OR5AL1P0C617 328 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 OR10G8Q8NGN5 311 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 MANBALQ9NQG1 85 aa7.69□□□□□ -1.18
TRAFD1-205ENST00000548277 TRAV1-1A0A0B4J248 108 aa7.68□□□□□ -1.18
TRAFD1-205ENST00000548277 RAB5CP51148 216 aa7.68□□□□□ -1.18
TRAFD1-205ENST00000548277 GAGE6Q13070 117 aa7.68□□□□□ -1.18
TRAFD1-205ENST00000548277 C11orf52Q96A22 123 aa7.68□□□□□ -1.18
TRAFD1-205ENST00000548277 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 GZMBP10144 247 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 EIF5AL1Q6IS14 154 aaKnown RBP7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 LINC00269Q8N2A0 174 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
TRAFD1-205ENST00000548277 IGLV10-54A0A075B6I4 117 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 SMIM17P0DL12 118 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 SULT1A2P50226 295 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 TPPP3Q9BW30 176 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 KIF25-AS1Q9Y6Z4 181 aa7.66□□□□□ -1.18
TRAFD1-205ENST00000548277 MIAQ16674 131 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 FER1L6-AS1Q8NA97 138 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
TRAFD1-205ENST00000548277 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 GNG4P50150 75 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 RPS20P60866 119 aaKnown RBP7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 RBX1P62877 108 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 MEF2BQ02080 365 aaPredicted RBP7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 TCTE3Q8IZS6 198 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 MED9Q9NWA0 146 aa7.64□□□□□ -1.19
TRAFD1-205ENST00000548277 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 PDE6DO43924 150 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 IFNA1P01562 189 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 P01737 135 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 MGPP08493 103 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 KRTAP26-1Q6PEX3 210 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 SLC51BQ86UW2 128 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 VAX2Q9UIW0 290 aa7.63□□□□□ -1.19
TRAFD1-205ENST00000548277 TRBV20OR9-2A0A075B6H5 130 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 BCL2P10415 239 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 CACNG7P62955 275 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 ODF1Q14990 250 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 TMEM97Q5BJF2 176 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 Q6ZRU5 148 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 SMIM12Q96EX1 92 aa7.62□□□□□ -1.19
TRAFD1-205ENST00000548277 TRBV25-1A0A075B6N4 114 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 A0A087WYN8 130 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 XKRY2A2RUG3 117 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 M0QY20 66 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 PKIAP61925 76 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 REG3AQ06141 175 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 LYZL1Q6UWQ5 148 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 BIN3Q9NQY0 253 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 PRR34Q9NV39 138 aa7.61□□□□□ -1.19
TRAFD1-205ENST00000548277 F2Z2F3 143 aa7.6□□□□□ -1.19
TRAFD1-205ENST00000548277 H7C1H1 209 aa7.6□□□□□ -1.19
TRAFD1-205ENST00000548277 NTF3P20783 257 aa7.6□□□□□ -1.19
TRAFD1-205ENST00000548277 CLRN3Q8NCR9 226 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms