RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LRP1Q07954 4544 aaKnown RBP13.21□□□□□ -0.29
SSH1-207ENST00000547862 RPL37AP61513 92 aaKnown RBP13.2□□□□□ -0.3
SSH1-207ENST00000547862 BAGE2Q86Y30 109 aa13.2□□□□□ -0.3
SSH1-207ENST00000547862 SNAI2O43623 268 aa13.19□□□□□ -0.3
SSH1-207ENST00000547862 MGPP08493 103 aa13.19□□□□□ -0.3
SSH1-207ENST00000547862 SMIM17P0DL12 118 aa13.19□□□□□ -0.3
SSH1-207ENST00000547862 S100A9P06702 114 aaKnown RBP13.18□□□□□ -0.3
SSH1-207ENST00000547862 PRSS1P07477 247 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 CXCL1P09341 107 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 PKIAP61925 76 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 MIAQ16674 131 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 DERL1Q9BUN8 251 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 TPPP3Q9BW30 176 aa13.18□□□□□ -0.3
SSH1-207ENST00000547862 FAT3Q8TDW7 4589 aa13.17□□□□□ -0.3
SSH1-207ENST00000547862 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
SSH1-207ENST00000547862 RBX1P62877 108 aa13.16□□□□□ -0.3
SSH1-207ENST00000547862 LINC00269Q8N2A0 174 aa13.16□□□□□ -0.3
SSH1-207ENST00000547862 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
SSH1-207ENST00000547862 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
SSH1-207ENST00000547862 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
SSH1-207ENST00000547862 TRBV25-1A0A075B6N4 114 aa13.15□□□□□ -0.3
SSH1-207ENST00000547862 OXTP01178 125 aa13.14□□□□□ -0.31
SSH1-207ENST00000547862 GZMBP10144 247 aa13.14□□□□□ -0.31
SSH1-207ENST00000547862 HNRNPA3P51991 378 aaKnown RBP13.14□□□□□ -0.31
SSH1-207ENST00000547862 TMEM97Q5BJF2 176 aa13.14□□□□□ -0.31
SSH1-207ENST00000547862 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
SSH1-207ENST00000547862 MBD3L1Q8WWY6 194 aa13.14□□□□□ -0.31
SSH1-207ENST00000547862 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
SSH1-207ENST00000547862 RPL35P42766 123 aaKnown RBP13.13□□□□□ -0.31
SSH1-207ENST00000547862 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
SSH1-207ENST00000547862 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
SSH1-207ENST00000547862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
SSH1-207ENST00000547862 UMAD1C9J7I0 102 aa13.12□□□□□ -0.31
SSH1-207ENST00000547862 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
SSH1-207ENST00000547862 ZNF345Q14585 488 aa13.12□□□□□ -0.31
SSH1-207ENST00000547862 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
SSH1-207ENST00000547862 IGHV1-24A0A0C4DH33 117 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 PANO1I0J062 215 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 KIF25-AS1Q9Y6Z4 181 aa13.11□□□□□ -0.31
SSH1-207ENST00000547862 BCL2L11O43521 198 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 REG3AQ06141 175 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 SUMO4Q6EEV6 95 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 KRTAP26-1Q6PEX3 210 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 C9orf163Q8N9P6 203 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
SSH1-207ENST00000547862 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
SSH1-207ENST00000547862 DGAT2L7PQ6IED9 249 aa13.09□□□□□ -0.31
SSH1-207ENST00000547862 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
SSH1-207ENST00000547862 DAZAP1Q96EP5 407 aaKnown RBP13.09□□□□□ -0.31
SSH1-207ENST00000547862 hDV102S1A0JD36 115 aa13.08□□□□□ -0.32
SSH1-207ENST00000547862 RAB5CP51148 216 aa13.08□□□□□ -0.32
SSH1-207ENST00000547862 IQCJQ1A5X6 159 aa13.08□□□□□ -0.32
SSH1-207ENST00000547862 OR2D3Q8NGH3 330 aa13.08□□□□□ -0.32
SSH1-207ENST00000547862 H7C1H1 209 aa13.07□□□□□ -0.32
SSH1-207ENST00000547862 M0QY20 66 aa13.07□□□□□ -0.32
SSH1-207ENST00000547862 MANBALQ9NQG1 85 aa13.07□□□□□ -0.32
SSH1-207ENST00000547862 C20orf203Q8NBC4 194 aa13.06□□□□□ -0.32
SSH1-207ENST00000547862 TMEM243Q9BU79 118 aa13.06□□□□□ -0.32
SSH1-207ENST00000547862 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
SSH1-207ENST00000547862 A0A0D9SG52 128 aa13.05□□□□□ -0.32
SSH1-207ENST00000547862 IGLC6P0CF74 106 aa13.05□□□□□ -0.32
SSH1-207ENST00000547862 CCL20P78556 96 aa13.05□□□□□ -0.32
SSH1-207ENST00000547862 GFRA4Q9GZZ7 299 aa13.05□□□□□ -0.32
SSH1-207ENST00000547862 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
SSH1-207ENST00000547862 C11orf52Q96A22 123 aa13.04□□□□□ -0.32
SSH1-207ENST00000547862 HMCN2Q8NDA2 5059 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 RAB19A4D1S5 217 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 UBE2L6O14933 153 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 CHTF8P0CG12 524 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 CACNG7P62955 275 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
SSH1-207ENST00000547862 RASL11AQ6T310 242 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 AP5S1Q9NUS5 200 aa13.03□□□□□ -0.32
SSH1-207ENST00000547862 IGKV3OR2-268A0A0C4DH90 116 aa13.02□□□□□ -0.33
SSH1-207ENST00000547862 GNG4P50150 75 aa13.02□□□□□ -0.33
SSH1-207ENST00000547862 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
SSH1-207ENST00000547862 DPH3Q96FX2 82 aa13.02□□□□□ -0.33
SSH1-207ENST00000547862 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
SSH1-207ENST00000547862 P01737 135 aa13.01□□□□□ -0.33
SSH1-207ENST00000547862 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
SSH1-207ENST00000547862 SULT1A2P50226 295 aa13.01□□□□□ -0.33
SSH1-207ENST00000547862 WDR73Q6P4I2 378 aa13.01□□□□□ -0.33
SSH1-207ENST00000547862 C19orf71A6NCJ1 209 aa13□□□□□ -0.33
SSH1-207ENST00000547862 AMTP48728 403 aa13□□□□□ -0.33
SSH1-207ENST00000547862 CNBPP62633 177 aaKnown RBP13□□□□□ -0.33
SSH1-207ENST00000547862 LYZL1Q6UWQ5 148 aa13□□□□□ -0.33
SSH1-207ENST00000547862 DPH3P1Q9H4G8 78 aa13□□□□□ -0.33
SSH1-207ENST00000547862 TRAV8-4A0A0B4J246 113 aa12.99□□□□□ -0.33
SSH1-207ENST00000547862 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
SSH1-207ENST00000547862 IFNA1P01562 189 aa12.99□□□□□ -0.33
SSH1-207ENST00000547862 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.98□□□□□ -0.33
SSH1-207ENST00000547862 COTL1Q14019 142 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms