RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 DERL1Q9BUN8 251 aa14.95□□□□□ -0.02
SMARCD1-204ENST00000547637 SNAI2O43623 268 aa14.94□□□□□ -0.02
SMARCD1-204ENST00000547637 RPL19P84098 196 aaKnown RBP14.94□□□□□ -0.02
SMARCD1-204ENST00000547637 CLRN3Q8NCR9 226 aa14.94□□□□□ -0.02
SMARCD1-204ENST00000547637 SSBP4Q9BWG4 385 aaPredicted RBP14.94□□□□□ -0.02
SMARCD1-204ENST00000547637 UMAD1C9J7I0 102 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 C9orf163Q8N9P6 203 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 AP1S3Q96PC3 154 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 CYTL1Q9NRR1 136 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 VAX2Q9UIW0 290 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 PLA2G2DQ9UNK4 145 aa14.93□□□□□ -0.02
SMARCD1-204ENST00000547637 PRSS1P07477 247 aa14.92□□□□□ -0.02
SMARCD1-204ENST00000547637 SSTP61278 116 aa14.92□□□□□ -0.02
SMARCD1-204ENST00000547637 H7C1H1 209 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 RBX1P62877 108 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 LINC00269Q8N2A0 174 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 MBD3L1Q8WWY6 194 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 MLST8Q9BVC4 326 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 PRR34Q9NV39 138 aa14.91□□□□□ -0.02
SMARCD1-204ENST00000547637 MUC21A0A0G2JKD1 596 aa14.9□□□□□ -0.02
SMARCD1-204ENST00000547637 MUC21A0A140T8X8 626 aa14.9□□□□□ -0.02
SMARCD1-204ENST00000547637 SCO2A0A1W2PP80 73 aa14.9□□□□□ -0.02
SMARCD1-204ENST00000547637 GAGE6Q13070 117 aa14.9□□□□□ -0.02
SMARCD1-204ENST00000547637 FAM213BQ8TBF2 198 aa14.9□□□□□ -0.02
SMARCD1-204ENST00000547637 IGHV1-24A0A0C4DH33 117 aa14.89□□□□□ -0.03
SMARCD1-204ENST00000547637 A0A0D9SG52 128 aa14.89□□□□□ -0.03
SMARCD1-204ENST00000547637 TMUB2Q71RG4 321 aa14.89□□□□□ -0.03
SMARCD1-204ENST00000547637 A0A1B0GV50 99 aa14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 CLPSL2Q6UWE3 100 aa14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 NTM-AS1Q6ZSK4 140 aa14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 KCNRGQ8N5I3 272 aa14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 DAZAP1Q96EP5 407 aaKnown RBP14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 DPH3Q96FX2 82 aa14.88□□□□□ -0.03
SMARCD1-204ENST00000547637 TRAV8-4A0A0B4J246 113 aa14.87□□□□□ -0.03
SMARCD1-204ENST00000547637 P01737 135 aa14.87□□□□□ -0.03
SMARCD1-204ENST00000547637 IQCJQ1A5X6 159 aa14.87□□□□□ -0.03
SMARCD1-204ENST00000547637 AP5S1Q9NUS5 200 aa14.87□□□□□ -0.03
SMARCD1-204ENST00000547637 MGPP08493 103 aa14.86□□□□□ -0.03
SMARCD1-204ENST00000547637 H2AFB1P0C5Y9 115 aa14.86□□□□□ -0.03
SMARCD1-204ENST00000547637 EIF5AP63241 154 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-204ENST00000547637 REG3AQ06141 175 aa14.86□□□□□ -0.03
SMARCD1-204ENST00000547637 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.85□□□□□ -0.03
SMARCD1-204ENST00000547637 RPS20P60866 119 aaKnown RBP14.85□□□□□ -0.03
SMARCD1-204ENST00000547637 ZNF345Q14585 488 aa14.85□□□□□ -0.03
SMARCD1-204ENST00000547637 TPPP3Q9BW30 176 aa14.85□□□□□ -0.03
SMARCD1-204ENST00000547637 KIF25-AS1Q9Y6Z4 181 aa14.85□□□□□ -0.03
SMARCD1-204ENST00000547637 G3V3Q6 166 aa14.84□□□□□ -0.03
SMARCD1-204ENST00000547637 GZMBP10144 247 aa14.84□□□□□ -0.03
SMARCD1-204ENST00000547637 SDIM1Q6ZPB5 146 aa14.84□□□□□ -0.03
SMARCD1-204ENST00000547637 KANTRA0A1W2PQU2 76 aa14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 hDV102S1A0JD36 115 aa14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 XKRY2A2RUG3 117 aa14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 CACNG7P62955 275 aa14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 FER1L6-AS1Q8NA97 138 aa14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.83□□□□□ -0.04
SMARCD1-204ENST00000547637 RPL35P42766 123 aaKnown RBP14.82□□□□□ -0.04
SMARCD1-204ENST00000547637 CNBPP62633 177 aaKnown RBP14.82□□□□□ -0.04
SMARCD1-204ENST00000547637 RGS21Q2M5E4 152 aa14.82□□□□□ -0.04
SMARCD1-204ENST00000547637 TMEM243Q9BU79 118 aa14.82□□□□□ -0.04
SMARCD1-204ENST00000547637 IGLV10-54A0A075B6I4 117 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 IGHV3-64A0A075B6Q5 118 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 A0A1B0GUV1 79 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 M0QY20 66 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 UBE2L6O14933 153 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 KRTAP26-1Q6PEX3 210 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 MANBALQ9NQG1 85 aa14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 LRP1Q07954 4544 aaKnown RBP14.81□□□□□ -0.04
SMARCD1-204ENST00000547637 WDR73Q6P4I2 378 aa14.8□□□□□ -0.04
SMARCD1-204ENST00000547637 Q6ZRU5 148 aa14.8□□□□□ -0.04
SMARCD1-204ENST00000547637 OR2D3Q8NGH3 330 aa14.8□□□□□ -0.04
SMARCD1-204ENST00000547637 F2Z2F3 143 aa14.79□□□□□ -0.04
SMARCD1-204ENST00000547637 TEX46H3BTG2 121 aa14.79□□□□□ -0.04
SMARCD1-204ENST00000547637 TRGC1P0CF51 173 aa14.79□□□□□ -0.04
SMARCD1-204ENST00000547637 RASL11AQ6T310 242 aa14.79□□□□□ -0.04
SMARCD1-204ENST00000547637 RNF185Q96GF1 192 aa14.79□□□□□ -0.04
SMARCD1-204ENST00000547637 SUMO4Q6EEV6 95 aa14.78□□□□□ -0.04
SMARCD1-204ENST00000547637 CFAP161Q6P656 301 aa14.78□□□□□ -0.04
SMARCD1-204ENST00000547637 BIN3Q9NQY0 253 aa14.78□□□□□ -0.04
SMARCD1-204ENST00000547637 HMSDA8MTL9 139 aa14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 SMLR1H3BR10 107 aa14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 NKX2-5P52952 324 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 C20orf203Q8NBC4 194 aa14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 SMIM12Q96EX1 92 aa14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 GNG13Q9P2W3 67 aa14.77□□□□□ -0.05
SMARCD1-204ENST00000547637 BCL2L11O43521 198 aa14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 IGLC6P0CF74 106 aa14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 SULT1A2P50226 295 aa14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 HNRNPA3P51991 378 aaKnown RBP14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 CIRBPQ14011 172 aaKnown RBP14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 PGLYRP4Q96LB8 373 aa14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 NIT2Q9NQR4 276 aa14.76□□□□□ -0.05
SMARCD1-204ENST00000547637 COTL1Q14019 142 aa14.75□□□□□ -0.05
SMARCD1-204ENST00000547637 CENPWQ5EE01 88 aa14.75□□□□□ -0.05
SMARCD1-204ENST00000547637 C11orf52Q96A22 123 aa14.75□□□□□ -0.05
SMARCD1-204ENST00000547637 DPH3P1Q9H4G8 78 aa14.75□□□□□ -0.05
SMARCD1-204ENST00000547637 IFNA1P01562 189 aa14.74□□□□□ -0.05
SMARCD1-204ENST00000547637 GNG4P50150 75 aa14.74□□□□□ -0.05
SMARCD1-204ENST00000547637 RAB5CP51148 216 aa14.74□□□□□ -0.05
SMARCD1-204ENST00000547637 PANO1I0J062 215 aa14.73□□□□□ -0.05
SMARCD1-204ENST00000547637 AMTP48728 403 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms