RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MRPS36P82909 103 aaKnown RBP9.84□□□□□ -0.83
PTCH1-212ENST00000546744 IGHV3-38A0A0C4DH36 116 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 XGP55808 180 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 LINC00310P59036 64 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 NREPQ16612 68 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 CTSZQ9UBR2 303 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 IGHV7-81A0A0B4J1V7 117 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 TRAV4A0A0B4J268 109 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 RPL39P62891 51 aaKnown RBP9.83□□□□□ -0.84
PTCH1-212ENST00000546744 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 J3QLI3 93 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 BRWD1-AS2P59051 145 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 FAM222AQ5U5X8 452 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 BPESC1Q9GZL8 116 aa9.83□□□□□ -0.84
PTCH1-212ENST00000546744 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 RPL18AQ02543 176 aaKnown RBP9.82□□□□□ -0.84
PTCH1-212ENST00000546744 BRK1Q8WUW1 75 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 FAM110AQ9BQ89 295 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 MSMBP08118 114 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 Q6ZPA2 131 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 NCKAP5O14513 1909 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-212ENST00000546744 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-212ENST00000546744 A0A1W2PNU3 283 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-212ENST00000546744 M0QXV9 152 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 MRPL36Q9P0J6 103 aaKnown RBP9.82□□□□□ -0.84
PTCH1-212ENST00000546744 ARHGAP21Q5T5U3 1957 aa9.82□□□□□ -0.84
PTCH1-212ENST00000546744 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
PTCH1-212ENST00000546744 LINC01356Q8N9X3 169 aa9.81□□□□□ -0.84
PTCH1-212ENST00000546744 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
PTCH1-212ENST00000546744 PROP1O75360 226 aa9.81□□□□□ -0.84
PTCH1-212ENST00000546744 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
PTCH1-212ENST00000546744 ABCA4P78363 2273 aa9.8□□□□□ -0.84
PTCH1-212ENST00000546744 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
PTCH1-212ENST00000546744 RNF114Q9Y508 228 aa9.8□□□□□ -0.84
PTCH1-212ENST00000546744 TNCP24821 2201 aa9.8□□□□□ -0.84
PTCH1-212ENST00000546744 U3KQE9 123 aa9.8□□□□□ -0.84
PTCH1-212ENST00000546744 A0A1W2PRX2 142 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 SP5Q6BEB4 398 aaPredicted RBP9.79□□□□□ -0.84
PTCH1-212ENST00000546744 A0A0J9YX75 114 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 LST1O00453 97 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
PTCH1-212ENST00000546744 REV3LO60673 3130 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 FAM208BQ5VWN6 2430 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 TRBV6-5A0A0K0K1A5 114 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 C3orf56Q8N813 242 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
PTCH1-212ENST00000546744 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 K7EQD1 137 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 TRIAP1O43715 76 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 SPRY4Q9C004 299 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 TNRC18O15417 2968 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-212ENST00000546744 PCNX3Q9H6A9 2034 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 RMI2Q96E14 147 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 C20orf173Q96LM9 149 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
PTCH1-212ENST00000546744 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
PTCH1-212ENST00000546744 TRBV12-3P01733 135 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-212ENST00000546744 IGFL2Q6UWQ7 119 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 DKK4Q9UBT3 224 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 NUP210LQ5VU65 1888 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 RPL35AP18077 110 aaKnown RBP9.77□□□□□ -0.85
PTCH1-212ENST00000546744 HIGD2BQ4VC39 106 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 FSTL3O95633 263 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 TIRAPP58753 221 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 NFE4Q86UQ8 179 aa9.77□□□□□ -0.85
PTCH1-212ENST00000546744 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 Q8N9W7 124 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 C10orf105Q8TEF2 133 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 FREM1Q5H8C1 2179 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 IGHV4-4A0A075B6R2 117 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 DAD1P61803 113 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 PCNX1Q96RV3 2341 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 PTPRQQ9UMZ3 2332 aa9.76□□□□□ -0.85
PTCH1-212ENST00000546744 MYO18BQ8IUG5 2567 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 USP17L23D6RBM5 183 aa9.75□□□□□ -0.85
PTCH1-212ENST00000546744 NDUFA1O15239 70 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms