RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
HOXC11-202ENST00000546378 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
HOXC11-202ENST00000546378 IGHV4-61A0A0C4DH41 118 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 CENPVL3A0A0U1RRI6 287 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 J3QQQ9 107 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
HOXC11-202ENST00000546378 ELANEP08246 267 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 IGHV4-30-2A0A087WSY4 118 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 IGHV3-53P01767 116 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 ODF3BA8MYP8 253 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 CFC1BP0CG36 223 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 CFC1P0CG37 223 aa11.01□□□□□ -0.65
HOXC11-202ENST00000546378 RNASE3P12724 160 aaKnown RBP11□□□□□ -0.65
HOXC11-202ENST00000546378 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 LY6G5BQ8NDX9 201 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 CLEC2BQ92478 149 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 VCX2Q9H322 139 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 M0R1W7 72 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 SLC25A20O43772 301 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 KRTAP10-9P60411 292 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 Q6ZUT4 128 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 TOMM6Q96B49 74 aa11□□□□□ -0.65
HOXC11-202ENST00000546378 CD28P10747 220 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 AJUBAQ96IF1 538 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 PIMREGQ9BSJ6 248 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
HOXC11-202ENST00000546378 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
HOXC11-202ENST00000546378 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 LMO4P61968 165 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 PMVKQ15126 192 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
HOXC11-202ENST00000546378 TSHBP01222 138 aa10.98□□□□□ -0.65
HOXC11-202ENST00000546378 A0A0J9YY99 117 aa10.98□□□□□ -0.65
HOXC11-202ENST00000546378 CRYGDP07320 174 aa10.98□□□□□ -0.65
HOXC11-202ENST00000546378 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
HOXC11-202ENST00000546378 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
HOXC11-202ENST00000546378 SNCGO76070 127 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 Q8N1Y9 231 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 MRAP2Q96G30 205 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
HOXC11-202ENST00000546378 CRLF1O75462 422 aa10.96□□□□□ -0.65
HOXC11-202ENST00000546378 UBE2E1P51965 193 aa10.96□□□□□ -0.65
HOXC11-202ENST00000546378 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
HOXC11-202ENST00000546378 CDIP1Q9H305 208 aa10.96□□□□□ -0.65
HOXC11-202ENST00000546378 TRBV7-1A0A0A6YYK4 115 aa10.96□□□□□ -0.66
HOXC11-202ENST00000546378 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.66
HOXC11-202ENST00000546378 GPHB5Q86YW7 130 aa10.96□□□□□ -0.66
HOXC11-202ENST00000546378 SIRPDQ9H106 197 aa10.96□□□□□ -0.66
HOXC11-202ENST00000546378 FLNBO75369 2602 aaKnown RBP10.95□□□□□ -0.66
HOXC11-202ENST00000546378 TRAV4A0A0B4J268 109 aa10.95□□□□□ -0.66
HOXC11-202ENST00000546378 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
HOXC11-202ENST00000546378 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 VCYO14598 125 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 ZFAND6Q6FIF0 208 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 SVIPQ8NHG7 77 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 PPDPFLQ8WWR9 84 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
HOXC11-202ENST00000546378 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
HOXC11-202ENST00000546378 IGLV4-69A0A075B6H9 119 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 TEN1Q86WV5 123 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 C10orf126Q8N4M7 172 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 Q8N6K4 173 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
HOXC11-202ENST00000546378 MINOS1-NBL1R4GNA1 71 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 ITPR2Q14571 2701 aa10.93□□□□□ -0.66
HOXC11-202ENST00000546378 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 C10orf105Q8TEF2 133 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 RNF223E7ERA6 249 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 CFHR3Q02985 330 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 OVOL1O14753 267 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 NDUFA7O95182 113 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 HOXD3P31249 432 aaPredicted RBP10.92□□□□□ -0.66
HOXC11-202ENST00000546378 TOMM7Q9P0U1 55 aa10.92□□□□□ -0.66
HOXC11-202ENST00000546378 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
HOXC11-202ENST00000546378 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
HOXC11-202ENST00000546378 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
HOXC11-202ENST00000546378 DAZ1Q9NQZ3 744 aaKnown RBP10.91□□□□□ -0.66
HOXC11-202ENST00000546378 TENM4Q6N022 2769 aa10.91□□□□□ -0.66
HOXC11-202ENST00000546378 TAL2Q16559 108 aa10.9□□□□□ -0.66
HOXC11-202ENST00000546378 TNFRSF18Q9Y5U5 241 aa10.9□□□□□ -0.66
HOXC11-202ENST00000546378 IGHV3-30P01768 117 aa10.9□□□□□ -0.67
HOXC11-202ENST00000546378 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.67
HOXC11-202ENST00000546378 LYRM7Q5U5X0 104 aa10.9□□□□□ -0.67
HOXC11-202ENST00000546378 TIMM21Q9BVV7 248 aa10.9□□□□□ -0.67
HOXC11-202ENST00000546378 APCP25054 2843 aa10.9□□□□□ -0.67
HOXC11-202ENST00000546378 DEFB131AP59861 70 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms