RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 SMLR1H3BR10 107 aa7.47□□□□□ -1.21
NECAP1-209ENST00000546181 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
NECAP1-209ENST00000546181 HNRNPA3P51991 378 aaKnown RBP7.47□□□□□ -1.21
NECAP1-209ENST00000546181 ZNF56Q15929 161 aa7.47□□□□□ -1.21
NECAP1-209ENST00000546181 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
NECAP1-209ENST00000546181 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
NECAP1-209ENST00000546181 TRBV6-8A0A0A6YYG3 113 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 ARPC5O15511 151 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 PAGE4O60829 102 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
NECAP1-209ENST00000546181 AKR1C3P42330 323 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
NECAP1-209ENST00000546181 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-209ENST00000546181 TRBV6-1A0A0K0K1D8 114 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 PANO1I0J062 215 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 CRPP02741 224 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 PRSS1P07477 247 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 ELOBQ15370 118 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 KCNIP4Q6PIL6 250 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 OR10G8Q8NGN5 311 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 STOML3Q8TAV4 291 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 CHCHD7Q9BUK0 85 aa7.45□□□□□ -1.22
NECAP1-209ENST00000546181 hCG_2014768A0A024R1R8 64 aa7.44□□□□□ -1.22
NECAP1-209ENST00000546181 SEC11BP0C7V7 166 aa7.44□□□□□ -1.22
NECAP1-209ENST00000546181 RAB4BP61018 213 aa7.44□□□□□ -1.22
NECAP1-209ENST00000546181 Q0VG73 95 aa7.44□□□□□ -1.22
NECAP1-209ENST00000546181 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
NECAP1-209ENST00000546181 F5H697 171 aa7.43□□□□□ -1.22
NECAP1-209ENST00000546181 RPL37AP61513 92 aaKnown RBP7.43□□□□□ -1.22
NECAP1-209ENST00000546181 GAGE6Q13070 117 aa7.43□□□□□ -1.22
NECAP1-209ENST00000546181 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
NECAP1-209ENST00000546181 FAM213BQ8TBF2 198 aa7.43□□□□□ -1.22
NECAP1-209ENST00000546181 DAZAP1Q96EP5 407 aaKnown RBP7.43□□□□□ -1.22
NECAP1-209ENST00000546181 ZNF471Q9BX82 626 aaPredicted RBP7.43□□□□□ -1.22
NECAP1-209ENST00000546181 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
NECAP1-209ENST00000546181 SNAI2O43623 268 aa7.42□□□□□ -1.22
NECAP1-209ENST00000546181 RBX1P62877 108 aa7.42□□□□□ -1.22
NECAP1-209ENST00000546181 KRTAP26-1Q6PEX3 210 aa7.42□□□□□ -1.22
NECAP1-209ENST00000546181 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
NECAP1-209ENST00000546181 MLST8Q9BVC4 326 aa7.42□□□□□ -1.22
NECAP1-209ENST00000546181 IGLV10-54A0A075B6I4 117 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 OXTP01178 125 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 GZMBP10144 247 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 C14orf177Q52M58 125 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 SPANXN1Q5VSR9 72 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 LINC00269Q8N2A0 174 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 TCEAL7Q9BRU2 100 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
NECAP1-209ENST00000546181 SERTAD4-AS1Q5TG53 156 aa7.4□□□□□ -1.22
NECAP1-209ENST00000546181 DERL1Q9BUN8 251 aa7.4□□□□□ -1.22
NECAP1-209ENST00000546181 H3BS24 57 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 MGPP08493 103 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 CXCL1P09341 107 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 MIAQ16674 131 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 Q6ZNX1 250 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 C9orf163Q8N9P6 203 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 MBD3L1Q8WWY6 194 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 TPPP3Q9BW30 176 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 PRR34Q9NV39 138 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 VAX2Q9UIW0 290 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
NECAP1-209ENST00000546181 PFDN1O60925 122 aa7.38□□□□□ -1.23
NECAP1-209ENST00000546181 RAB5CP51148 216 aa7.38□□□□□ -1.23
NECAP1-209ENST00000546181 CCL20P78556 96 aa7.38□□□□□ -1.23
NECAP1-209ENST00000546181 TMUB2Q71RG4 321 aa7.38□□□□□ -1.23
NECAP1-209ENST00000546181 KCNRGQ8N5I3 272 aa7.38□□□□□ -1.23
NECAP1-209ENST00000546181 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
NECAP1-209ENST00000546181 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 SMIM17P0DL12 118 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 RPL35P42766 123 aaKnown RBP7.37□□□□□ -1.23
NECAP1-209ENST00000546181 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 SDIM1Q6ZPB5 146 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 C20orf203Q8NBC4 194 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
NECAP1-209ENST00000546181 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 M0QY20 66 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 SLPIP03973 132 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 NKX2-5P52952 324 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-209ENST00000546181 REG3AQ06141 175 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 IQCJQ1A5X6 159 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
NECAP1-209ENST00000546181 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.36□□□□□ -1.23
NECAP1-209ENST00000546181 IGHV1-24A0A0C4DH33 117 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 hDV102S1A0JD36 115 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 RAB19A4D1S5 217 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 CENPWQ5EE01 88 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 OR2D3Q8NGH3 330 aa7.35□□□□□ -1.23
NECAP1-209ENST00000546181 GNG13Q9P2W3 67 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms