RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 Q6ZSA8 131 aa14.95□□□□□ -0.02
CHD4-214ENST00000545942 KIF25-AS1Q9Y6Z4 181 aa14.95□□□□□ -0.02
CHD4-214ENST00000545942 DAZAP1Q96EP5 407 aaKnown RBP14.94□□□□□ -0.02
CHD4-214ENST00000545942 IGLV2-8P01709 118 aa14.93□□□□□ -0.02
CHD4-214ENST00000545942 SULT1A2P50226 295 aa14.93□□□□□ -0.02
CHD4-214ENST00000545942 PKIAP61925 76 aa14.93□□□□□ -0.02
CHD4-214ENST00000545942 SMIM12Q96EX1 92 aa14.93□□□□□ -0.02
CHD4-214ENST00000545942 CRPP02741 224 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 GNG4P50150 75 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 RPS20P60866 119 aaKnown RBP14.92□□□□□ -0.02
CHD4-214ENST00000545942 MEF2BQ02080 365 aaPredicted RBP14.92□□□□□ -0.02
CHD4-214ENST00000545942 MPV17L2Q567V2 206 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 TMEM97Q5BJF2 176 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 OR2D3Q8NGH3 330 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 CHCHD5Q9BSY4 110 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 TPPP3Q9BW30 176 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 C1orf43Q9BWL3 253 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 VAX2Q9UIW0 290 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 DNAH8Q96JB1 4490 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 PDE6DO43924 150 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 IGLC6P0CF74 106 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 GZMBP10144 247 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 ENHOQ6UWT2 76 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 C15orf54Q8N8G6 183 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 FER1L6-AS1Q8NA97 138 aa14.92□□□□□ -0.02
CHD4-214ENST00000545942 VPS13BQ7Z7G8 4022 aa14.91□□□□□ -0.02
CHD4-214ENST00000545942 RAB19A4D1S5 217 aa14.91□□□□□ -0.02
CHD4-214ENST00000545942 C19orf71A6NCJ1 209 aa14.91□□□□□ -0.02
CHD4-214ENST00000545942 IFNA1P01562 189 aa14.91□□□□□ -0.02
CHD4-214ENST00000545942 ANGP03950 147 aaKnown RBP14.91□□□□□ -0.02
CHD4-214ENST00000545942 TCTE3Q8IZS6 198 aa14.91□□□□□ -0.02
CHD4-214ENST00000545942 LINC01620Q4KN68 170 aa14.9□□□□□ -0.02
CHD4-214ENST00000545942 NTM-AS1Q6ZSK4 140 aa14.9□□□□□ -0.02
CHD4-214ENST00000545942 XKRY2A2RUG3 117 aa14.89□□□□□ -0.03
CHD4-214ENST00000545942 CACNG7P62955 275 aa14.89□□□□□ -0.03
CHD4-214ENST00000545942 H7C1H1 209 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 P01737 135 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 MGPP08493 103 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 C14orf177Q52M58 125 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 SLC51BQ86UW2 128 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 BIN3Q9NQY0 253 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 MED9Q9NWA0 146 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 HERC1Q15751 4861 aa14.88□□□□□ -0.03
CHD4-214ENST00000545942 TRBV20OR9-2A0A075B6H5 130 aa14.87□□□□□ -0.03
CHD4-214ENST00000545942 TRBV25-1A0A075B6N4 114 aa14.87□□□□□ -0.03
CHD4-214ENST00000545942 F2Z2F3 143 aa14.87□□□□□ -0.03
CHD4-214ENST00000545942 M0QY20 66 aa14.87□□□□□ -0.03
CHD4-214ENST00000545942 BCL2P10415 239 aa14.87□□□□□ -0.03
CHD4-214ENST00000545942 SRRM2Q9UQ35 2752 aaKnown RBP14.86□□□□□ -0.03
CHD4-214ENST00000545942 PLA2G1BP04054 148 aaKnown RBP14.86□□□□□ -0.03
CHD4-214ENST00000545942 MIAQ16674 131 aa14.86□□□□□ -0.03
CHD4-214ENST00000545942 LINC00528Q8N1L1 170 aa14.85□□□□□ -0.03
CHD4-214ENST00000545942 MYCBP2O75592 4640 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 RBX1P62877 108 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 GAGE6Q13070 117 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 IQCJQ1A5X6 159 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 SUMO4Q6EEV6 95 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 SCXQ7RTU7 201 aa14.84□□□□□ -0.03
CHD4-214ENST00000545942 DMBT1Q9UGM3 2413 aaPredicted RBP14.83□□□□□ -0.03
CHD4-214ENST00000545942 IGHV1-24A0A0C4DH33 117 aa14.83□□□□□ -0.04
CHD4-214ENST00000545942 TRGC1P0CF51 173 aa14.83□□□□□ -0.04
CHD4-214ENST00000545942 TAGLN2P37802 199 aaKnown RBP14.83□□□□□ -0.04
CHD4-214ENST00000545942 LYZL1Q6UWQ5 148 aa14.83□□□□□ -0.04
CHD4-214ENST00000545942 PRR34Q9NV39 138 aa14.83□□□□□ -0.04
CHD4-214ENST00000545942 HLA-DQA1P01909 254 aa14.82□□□□□ -0.04
CHD4-214ENST00000545942 CHAC1Q9BUX1 264 aa14.82□□□□□ -0.04
CHD4-214ENST00000545942 FLG2Q5D862 2391 aaPredicted RBP14.82□□□□□ -0.04
CHD4-214ENST00000545942 USP17L23D6RBM5 183 aa14.81□□□□□ -0.04
CHD4-214ENST00000545942 NTF3P20783 257 aa14.81□□□□□ -0.04
CHD4-214ENST00000545942 RASL11AQ6T310 242 aa14.81□□□□□ -0.04
CHD4-214ENST00000545942 LINC00269Q8N2A0 174 aa14.81□□□□□ -0.04
CHD4-214ENST00000545942 C9orf62Q8N4C0 152 aa14.81□□□□□ -0.04
CHD4-214ENST00000545942 NKX2-5P52952 324 aaPredicted RBP14.8□□□□□ -0.04
CHD4-214ENST00000545942 CLPSL2Q6UWE3 100 aa14.8□□□□□ -0.04
CHD4-214ENST00000545942 NUDT10Q8NFP7 164 aa14.8□□□□□ -0.04
CHD4-214ENST00000545942 NUDT11Q96G61 164 aa14.8□□□□□ -0.04
CHD4-214ENST00000545942 DPH3P1Q9H4G8 78 aa14.8□□□□□ -0.04
CHD4-214ENST00000545942 CTRLP40313 264 aa14.78□□□□□ -0.04
CHD4-214ENST00000545942 WDR73Q6P4I2 378 aa14.78□□□□□ -0.04
CHD4-214ENST00000545942 NIT2Q9NQR4 276 aa14.78□□□□□ -0.04
CHD4-214ENST00000545942 RPP21Q9H633 154 aaKnown RBP14.77□□□□□ -0.04
CHD4-214ENST00000545942 REG3AQ06141 175 aa14.76□□□□□ -0.05
CHD4-214ENST00000545942 CIRBP-AS1Q8TBR5 109 aa14.76□□□□□ -0.05
CHD4-214ENST00000545942 PGLYRP4Q96LB8 373 aa14.76□□□□□ -0.05
CHD4-214ENST00000545942 TMEM243Q9BU79 118 aa14.76□□□□□ -0.05
CHD4-214ENST00000545942 KRTAP26-1Q6PEX3 210 aa14.75□□□□□ -0.05
CHD4-214ENST00000545942 Q6ZNX1 250 aa14.75□□□□□ -0.05
CHD4-214ENST00000545942 CNFNQ9BYD5 112 aa14.75□□□□□ -0.05
CHD4-214ENST00000545942 RNASE7Q9H1E1 156 aaKnown RBP14.75□□□□□ -0.05
CHD4-214ENST00000545942 K7EN84 100 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 PRSS1P07477 247 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 TWIST1Q15672 202 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 DGAT2L7PQ6IED9 249 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 OCC1Q8TAD7 63 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 DEFB104AQ8WTQ1 72 aa14.74□□□□□ -0.05
CHD4-214ENST00000545942 A0A1B0GUV1 79 aa14.73□□□□□ -0.05
CHD4-214ENST00000545942 AKAP14Q86UN6 197 aa14.73□□□□□ -0.05
CHD4-214ENST00000545942 C20orf203Q8NBC4 194 aa14.73□□□□□ -0.05
CHD4-214ENST00000545942 IGLV4-60A0A075B6I1 120 aa14.71□□□□□ -0.05
CHD4-214ENST00000545942 IGLV10-54A0A075B6I4 117 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms