RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PLXNA2O75051 1894 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 TRAV23DV6A0A075B6W5 121 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 JMJD7-PLA2G4BH0Y9G9 81 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 H7C2G1 150 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 ZZEF1O43149 2961 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 P0C879 139 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 RPL27AP46776 148 aaKnown RBP3.73□□□□□ -1.81
UBE4A-203ENST00000545354 LMO4P61968 165 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 MUSTN1Q8IVN3 82 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 Q8IYB0 196 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 GOLGA2P5Q9HBQ8 144 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
UBE4A-203ENST00000545354 CEP250Q9BV73 2442 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 MYO16Q9Y6X6 1858 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 SPEGQ15772 3267 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 ZFYVE26Q68DK2 2539 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 IGHV5-51A0A0C4DH38 117 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 ARMS2P0C7Q2 107 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 C9orf116Q5BN46 136 aaPredicted RBP3.72□□□□□ -1.81
UBE4A-203ENST00000545354 CRIP3Q6Q6R5 217 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 IGFL3Q6UXB1 125 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 OBSCN-AS1Q96MR7 158 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 TMEM14CQ9P0S9 112 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 UNC79Q9P2D8 2635 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 PHF3Q92576 2039 aaKnown RBP3.72□□□□□ -1.81
UBE4A-203ENST00000545354 GPR179Q6PRD1 2367 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 AGRNO00468 2067 aa3.72□□□□□ -1.81
UBE4A-203ENST00000545354 FLNBO75369 2602 aaKnown RBP3.72□□□□□ -1.81
UBE4A-203ENST00000545354 A0A087WVE0 104 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 IGHV1-45A0A0A0MS14 117 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 I3L3M4 83 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 LEPROTO15243 131 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 PROP1O75360 226 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 CDK2AP2O75956 126 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 IGKV1-39P01597 117 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 IGHV3-13P01766 116 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 IGKV1D-39P04432 117 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 LINC00271P0C7V0 271 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 RPL28P46779 137 aaKnown RBP3.71□□□□□ -1.81
UBE4A-203ENST00000545354 Q6ZRP5 223 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 LINC01560Q8TB33 94 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 TMEM14BQ9NUH8 114 aa3.71□□□□□ -1.81
UBE4A-203ENST00000545354 COL4A4P53420 1690 aaPredicted RBP3.71□□□□□ -1.82
UBE4A-203ENST00000545354 FRYQ5TBA9 3013 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 IGHV3OR16-13A0A075B7E8 117 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 TRBV7-4A0A0J9YYF1 115 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 IGKV1-16P04430 117 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 CD24P25063 80 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 B3GALT5-AS1P59052 145 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 Q6ZTC4 211 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 C22orf34Q6ZV56 151 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 C19orf73Q9NVV2 129 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 MYO7AQ13402 2215 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 ARID1AO14497 2285 aa3.71□□□□□ -1.82
UBE4A-203ENST00000545354 DOCK7Q96N67 2140 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 HEATR1Q9H583 2144 aaKnown RBP3.7□□□□□ -1.82
UBE4A-203ENST00000545354 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF503-AS2A6NEH8 195 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 TRGV3P03979 118 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 EGR2P11161 476 aaPredicted RBP3.7□□□□□ -1.82
UBE4A-203ENST00000545354 FXYD7P58549 80 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 LINC00846Q9NV44 126 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 LRP4O75096 1905 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 MAST4O15021 2626 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 DYSFO75923 2080 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 IGIPA6NJ69 53 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 IGLV3-1P01715 115 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 RNASE1P07998 156 aaKnown RBP3.7□□□□□ -1.82
UBE4A-203ENST00000545354 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
UBE4A-203ENST00000545354 CNFNQ9BYD5 112 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
UBE4A-203ENST00000545354 PCNX3Q9H6A9 2034 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 GON4LQ3T8J9 2241 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 ATG2BQ96BY7 2078 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 C5orf67F2Z3F1 127 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 H0YGX0 51 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 NDUFB1O75438 58 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 DEFA4P12838 97 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 CXCL17Q6UXB2 119 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 CASC2Q6XLA1 102 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 LYPD1Q8N2G4 141 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 LINC00467Q9BRT7 94 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF702PQ9H963 129 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 BPTFQ12830 3046 aa3.69□□□□□ -1.82
UBE4A-203ENST00000545354 CXorf51AA0A1B0GTR3 108 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 RPS27P42677 84 aaKnown RBP3.68□□□□□ -1.82
UBE4A-203ENST00000545354 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 ZNF833PQ6ZTB9 187 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 Q86TA4 180 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 TMEM61Q8N0U2 210 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 EML6Q6ZMW3 1958 aa3.68□□□□□ -1.82
UBE4A-203ENST00000545354 MDC1Q14676 2089 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms