RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
CHFR-224ENST00000545046 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
CHFR-224ENST00000545046 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
CHFR-224ENST00000545046 CRLF1O75462 422 aa12.1□□□□□ -0.47
CHFR-224ENST00000545046 ERASQ7Z444 233 aa12.1□□□□□ -0.47
CHFR-224ENST00000545046 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
CHFR-224ENST00000545046 IGHV3-73A0A0B4J1V6 119 aa12.09□□□□□ -0.47
CHFR-224ENST00000545046 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
CHFR-224ENST00000545046 MRPL35Q9NZE8 188 aaKnown RBP12.09□□□□□ -0.47
CHFR-224ENST00000545046 AZU1P20160 251 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 TP73-AS1Q9UF72 201 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
CHFR-224ENST00000545046 COL5A1-AS1Q5SY13 56 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 C19orf73Q9NVV2 129 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 MRPL16Q9NX20 251 aaKnown RBP12.08□□□□□ -0.48
CHFR-224ENST00000545046 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 TP53TG1Q9Y2A0 90 aa12.08□□□□□ -0.48
CHFR-224ENST00000545046 RHODO00212 210 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 PLNP26678 52 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 TCTAP57738 103 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 NACAE9PAV3 2078 aa12.07□□□□□ -0.48
CHFR-224ENST00000545046 I3L3M4 83 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 RIPPLY3P57055 190 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 CHTOPQ9Y3Y2 248 aaKnown RBP12.06□□□□□ -0.48
CHFR-224ENST00000545046 F8VRH5 84 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
CHFR-224ENST00000545046 NMUP48645 174 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 RHOHQ15669 191 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 BAALCQ8WXS3 180 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 C1QTNF4Q9BXJ3 329 aa12.06□□□□□ -0.48
CHFR-224ENST00000545046 NSD1Q96L73 2696 aaPredicted RBP12.05□□□□□ -0.48
CHFR-224ENST00000545046 RS1O15537 224 aa12.05□□□□□ -0.48
CHFR-224ENST00000545046 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
CHFR-224ENST00000545046 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
CHFR-224ENST00000545046 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
CHFR-224ENST00000545046 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
CHFR-224ENST00000545046 FGF6P10767 208 aa12.04□□□□□ -0.48
CHFR-224ENST00000545046 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
CHFR-224ENST00000545046 RPL39P62891 51 aaKnown RBP12.03□□□□□ -0.48
CHFR-224ENST00000545046 GTSCR1Q86UQ5 136 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
CHFR-224ENST00000545046 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 DLEU1O43261 78 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 TSHBP01222 138 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 INSL3P51460 131 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 C12orf54Q6X4T0 127 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 IL17DQ8TAD2 202 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 TIMM17AQ99595 171 aa12.03□□□□□ -0.48
CHFR-224ENST00000545046 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.48
CHFR-224ENST00000545046 P0DMU3 169 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 FAM231AP0DMU4 169 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 FAM231CP0DMU5 169 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 MPV17L2Q567V2 206 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 HIVEP1P15822 2718 aa12.02□□□□□ -0.48
CHFR-224ENST00000545046 TRGV1A0A0A0MS02 117 aa12.02□□□□□ -0.49
CHFR-224ENST00000545046 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.49
CHFR-224ENST00000545046 NIPBLQ6KC79 2804 aaeCLIP12.01□□□□□ -0.49
CHFR-224ENST00000545046 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
CHFR-224ENST00000545046 SIVA1O15304 175 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 Q6ZSN1 163 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 PCP2Q8IVA1 136 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
CHFR-224ENST00000545046 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
CHFR-224ENST00000545046 PMVKQ15126 192 aa12□□□□□ -0.49
CHFR-224ENST00000545046 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
CHFR-224ENST00000545046 C16orf74Q96GX8 76 aa12□□□□□ -0.49
CHFR-224ENST00000545046 C2CD3Q4AC94 2353 aa12□□□□□ -0.49
CHFR-224ENST00000545046 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
CHFR-224ENST00000545046 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
CHFR-224ENST00000545046 BVES-AS1Q5T3Y7 98 aa11.98□□□□□ -0.49
CHFR-224ENST00000545046 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
CHFR-224ENST00000545046 CITED1Q99966 193 aa11.98□□□□□ -0.49
CHFR-224ENST00000545046 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
CHFR-224ENST00000545046 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
CHFR-224ENST00000545046 CST9LQ9H4G1 147 aa11.98□□□□□ -0.49
CHFR-224ENST00000545046 RRN3P1Q2M238 152 aa11.97□□□□□ -0.49
CHFR-224ENST00000545046 Q6ZTI0 123 aa11.97□□□□□ -0.49
CHFR-224ENST00000545046 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
CHFR-224ENST00000545046 TRAV4A0A0B4J268 109 aa11.96□□□□□ -0.5
CHFR-224ENST00000545046 Q9UF83 564 aa11.96□□□□□ -0.5
CHFR-224ENST00000545046 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
CHFR-224ENST00000545046 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
CHFR-224ENST00000545046 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
CHFR-224ENST00000545046 TTTY13Q9BZ97 58 aa11.94□□□□□ -0.5
CHFR-224ENST00000545046 HSD52Q0P140 79 aa11.94□□□□□ -0.5
CHFR-224ENST00000545046 IGLV4-69A0A075B6H9 119 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 PLAC8L1A1L4L8 177 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 OR11H2Q8NH07 326 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 SPATA3Q8NHX4 192 aa11.93□□□□□ -0.5
CHFR-224ENST00000545046 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms