RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 DEFB113Q30KQ7 82 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 ABCA2Q9BZC7 2435 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 TACC2O95359 2948 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 UBE2D3P61077 147 aa9.59□□□□□ -0.88
CPSF7-223ENST00000544669 UBE2D2P62837 147 aa9.59□□□□□ -0.88
CPSF7-223ENST00000544669 C21orf62-AS1Q17RA5 79 aa9.59□□□□□ -0.88
CPSF7-223ENST00000544669 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.88
CPSF7-223ENST00000544669 AMELXQ99217 191 aa9.59□□□□□ -0.88
CPSF7-223ENST00000544669 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
CPSF7-223ENST00000544669 INSP01308 110 aa9.58□□□□□ -0.88
CPSF7-223ENST00000544669 DCHS2Q6V1P9 2916 aa9.58□□□□□ -0.88
CPSF7-223ENST00000544669 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
CPSF7-223ENST00000544669 WFDC2Q14508 124 aa9.57□□□□□ -0.88
CPSF7-223ENST00000544669 SIGMAR1Q99720 223 aa9.57□□□□□ -0.88
CPSF7-223ENST00000544669 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 TSPAN13O95857 204 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 CD28P10747 220 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-223ENST00000544669 BEAN1Q3B7T3 259 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 PRO0461Q9UI25 63 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 SELENOKQ9Y6D0 94 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 DCHS1Q96JQ0 3298 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 MUC4Q99102 2169 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 M0QXV9 152 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 APOMO95445 188 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 EMP1P54849 157 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 NRGNQ92686 78 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 LINC01587Q99440 93 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
CPSF7-223ENST00000544669 IGHV3-53P01767 116 aa9.55□□□□□ -0.88
CPSF7-223ENST00000544669 SLURP1P55000 103 aa9.55□□□□□ -0.88
CPSF7-223ENST00000544669 CFAP126Q5VTH2 177 aa9.55□□□□□ -0.88
CPSF7-223ENST00000544669 RNF183Q96D59 192 aa9.55□□□□□ -0.88
CPSF7-223ENST00000544669 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 CFC1P0CG37 223 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 SCGB1C2P0DMR2 95 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 PSMB2P49721 201 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 ETDBQ3ZM63 59 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 YAE1D1Q9NRH1 226 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 IGHV1-58A0A0C4DH39 117 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 GAGE12HA6NDE8 117 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 TMEM61Q8N0U2 210 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 SPATA25Q9BR10 227 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
CPSF7-223ENST00000544669 RS1O15537 224 aa9.53□□□□□ -0.88
CPSF7-223ENST00000544669 CIDEAO60543 219 aa9.53□□□□□ -0.88
CPSF7-223ENST00000544669 COPS9Q8WXC6 57 aa9.53□□□□□ -0.88
CPSF7-223ENST00000544669 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 HTN1P15515 57 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 TIMM17BO60830 172 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 TIRAPP58753 221 aa9.52□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
CPSF7-223ENST00000544669 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 IFITM1P13164 125 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 FOXI1Q12951 378 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 PPDPFLQ8WWR9 84 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
CPSF7-223ENST00000544669 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
CPSF7-223ENST00000544669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.891e-7■■■□□ 17.2
CPSF7-223ENST00000544669 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 A4D1N5 150 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 DGAT2L7PQ6IED9 249 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 TEN1Q86WV5 123 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 STHQ8IWL8 128 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 MAPK1IP1LQ8NDC0 245 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 OPRPNQ99935 248 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-223ENST00000544669 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 DOPEY1Q5JWR5 2465 aa9.5□□□□□ -0.89
CPSF7-223ENST00000544669 TMEM262E9PQX1 116 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 COX6CP09669 75 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 Q96MF0 132 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1BA6NDE4 496 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1EA6NEQ0 496 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 RBMY1DP0C7P1 496 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
CPSF7-223ENST00000544669 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 TSSC4Q9Y5U2 329 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-223ENST00000544669 AKAP6Q13023 2319 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms