RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
DDX11-227ENST00000544652 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
DDX11-227ENST00000544652 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
DDX11-227ENST00000544652 DYNC2H1Q8NCM8 4307 aaKnown RBP9.11□□□□□ -0.95
DDX11-227ENST00000544652 TRBV24-1A0A075B6N3 115 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 A0A096LPF7 62 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 F5H697 171 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 M0QY20 66 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 S100A1P23297 94 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 FAM104BQ5XKR9 115 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 Q9UF83 564 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
DDX11-227ENST00000544652 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
DDX11-227ENST00000544652 H7C1H1 209 aa9.09□□□□□ -0.95
DDX11-227ENST00000544652 GYPEP15421 78 aa9.09□□□□□ -0.95
DDX11-227ENST00000544652 MRPL23Q16540 153 aaKnown RBP9.09□□□□□ -0.95
DDX11-227ENST00000544652 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
DDX11-227ENST00000544652 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
DDX11-227ENST00000544652 P0DMU3 169 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 COX19Q49B96 90 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 TMEM136Q6ZRR5 245 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 MRAP2Q96G30 205 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
DDX11-227ENST00000544652 TRBV7-3A0A075B6L6 115 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 TGIF2-C20orf24A0A0A6YYL0 155 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 NUDT3O95989 172 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
DDX11-227ENST00000544652 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 GNB1LQ9BYB4 327 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
DDX11-227ENST00000544652 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 SRIP30626 198 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 UBE2D3P61077 147 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 UBE2D2P62837 147 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
DDX11-227ENST00000544652 NEGR1Q7Z3B1 354 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
DDX11-227ENST00000544652 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
DDX11-227ENST00000544652 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 HLA-DQA1P01909 254 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAGE1Q13065 139 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAGE4Q13068 117 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAGE5Q13069 117 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
DDX11-227ENST00000544652 PPBPP02775 128 aa9.04□□□□□ -0.96
DDX11-227ENST00000544652 MT-ND6P03923 174 aa9.04□□□□□ -0.96
DDX11-227ENST00000544652 RPS10P46783 165 aaKnown RBP9.04□□□□□ -0.96
DDX11-227ENST00000544652 NRACQ8N912 160 aa9.04□□□□□ -0.96
DDX11-227ENST00000544652 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
DDX11-227ENST00000544652 PPP1R17O96001 155 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 TIRAPP58753 221 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 ESRGQ1W209 222 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
DDX11-227ENST00000544652 D6R8Y8 96 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 SMKR1H3BMG3 65 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 PHOX2AO14813 284 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 SCO1O75880 301 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 NCR2O95944 276 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 CKS2P33552 79 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 DAZ4Q86SG3 579 aaKnown RBP9.02□□□□□ -0.97
DDX11-227ENST00000544652 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
DDX11-227ENST00000544652 DAZ3Q9NR90 486 aaKnown RBP9.02□□□□□ -0.97
DDX11-227ENST00000544652 COLCA2A8K830 154 aa9.01□□□□□ -0.97
DDX11-227ENST00000544652 APCSP02743 223 aa9.01□□□□□ -0.97
DDX11-227ENST00000544652 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
DDX11-227ENST00000544652 LGALS9CQ6DKI2 356 aa9.01□□□□□ -0.97
DDX11-227ENST00000544652 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
DDX11-227ENST00000544652 LINC00588Q9Y4M8 146 aa9.01□□□□□ -0.97
DDX11-227ENST00000544652 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
DDX11-227ENST00000544652 PRSS47A8MTI9 375 aa9□□□□□ -0.97
DDX11-227ENST00000544652 TNFRSF6BO95407 300 aa9□□□□□ -0.97
DDX11-227ENST00000544652 CCL18P55774 89 aa9□□□□□ -0.97
DDX11-227ENST00000544652 C20orf78Q9BR46 151 aa9□□□□□ -0.97
DDX11-227ENST00000544652 UPK3BQ9BT76 320 aa9□□□□□ -0.97
DDX11-227ENST00000544652 ST20Q9HBF5 79 aa9□□□□□ -0.97
DDX11-227ENST00000544652 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 NPYP01303 97 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
DDX11-227ENST00000544652 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
DDX11-227ENST00000544652 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 PRELID3AQ96N28 172 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 TMEM70Q9BUB7 260 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 MRPS16Q9Y3D3 137 aaKnown RBP8.99□□□□□ -0.97
DDX11-227ENST00000544652 TRAPPC1Q9Y5R8 145 aa8.99□□□□□ -0.97
DDX11-227ENST00000544652 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
DDX11-227ENST00000544652 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms