RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 H3BVH4 76 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 GNRH2O43555 120 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 NANOS2P60321 138 aaKnown RBP4.69□□□□□ -1.66
CDCA3-209ENST00000544610 ZNF876PQ49A33 203 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 MUC21Q5SSG8 566 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 FAM104BQ5XKR9 115 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 LINC00612Q8N6U2 182 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 MUC4Q99102 2169 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 TMSB15BA0A087X1C1 80 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 GRIFINA4D1Z8 144 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 C1orf196B1AJZ1 125 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 K7EMI3 77 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 M0R381 172 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 SPINK4O60575 86 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 APCSP02743 223 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 GZMBP10144 247 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 RPS10P46783 165 aaKnown RBP4.68□□□□□ -1.66
CDCA3-209ENST00000544610 RPL32P62910 135 aaKnown RBP4.68□□□□□ -1.66
CDCA3-209ENST00000544610 TWIST1Q15672 202 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 COA6Q5JTJ3 125 aaKnown RBP4.68□□□□□ -1.66
CDCA3-209ENST00000544610 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 DPH3P1Q9H4G8 78 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 MDFICQ9P1T7 246 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
CDCA3-209ENST00000544610 PLAC8L1A1L4L8 177 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 H7C1H1 209 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 TCAPO15273 167 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 SMIM17P0DL12 118 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 FXYD7P58549 80 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 RAB5BP61020 215 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
CDCA3-209ENST00000544610 SLAQ13239 276 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 OR10J3Q5JRS4 329 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 MRPL54Q6P161 138 aaKnown RBP4.67□□□□□ -1.66
CDCA3-209ENST00000544610 Q6ZQT7 251 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 ORMDL3Q8N138 153 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 Q8NAQ8 132 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 TPPP3Q9BW30 176 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 KIF25-AS1Q9Y6Z4 181 aa4.67□□□□□ -1.66
CDCA3-209ENST00000544610 TRAV4A0A0B4J268 109 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 TRBV10-1A0A0K0K1A3 114 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 A0A1B0GVY2 172 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 LINC01549A6NIU2 74 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 IGLL5B9A064 214 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 DEFB4AO15263 64 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 RS1O15537 224 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 TRGC2P03986 189 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 CRYGDP07320 174 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 PRB4P10163 310 aaPredicted RBP4.66□□□□□ -1.66
CDCA3-209ENST00000544610 RAB4AP20338 218 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 CAMPP49913 170 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 RAB4BP61018 213 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 Q0VG73 95 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 FABP9Q0Z7S8 132 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 UFSP1Q6NVU6 142 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 LINC00336Q6ZUF6 198 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 PACRGQ96M98 296 aaPredicted RBP4.66□□□□□ -1.66
CDCA3-209ENST00000544610 C20orf78Q9BR46 151 aa4.66□□□□□ -1.66
CDCA3-209ENST00000544610 TRBV6-5A0A0K0K1A5 114 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 IGHV3-53P01767 116 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 SPART-AS1P0CW21 52 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 AZU1P20160 251 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 EVI2AP22794 236 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 G0S2P27469 103 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 LINC00315P59091 139 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 RNF185Q96GF1 192 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 DNAJC30Q96LL9 226 aa4.65□□□□□ -1.67
CDCA3-209ENST00000544610 ALKBH7Q9BT30 221 aaPredicted RBP4.65□□□□□ -1.67
CDCA3-209ENST00000544610 HSPG2P98160 4391 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 IGHV4-28A0A0C4DH34 117 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 TRBV6-4A0A1B0GX49 114 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 LINC01546A6NGU7 62 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 ESDP10768 282 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HTN1P15515 57 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 CKS2P33552 79 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 MRPL51Q4U2R6 128 aaKnown RBP4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
CDCA3-209ENST00000544610 CFAP126Q5VTH2 177 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 Q6ZTC4 211 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 AMN1Q8IY45 258 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 NXT2Q9NPJ8 142 aaKnown RBP4.64□□□□□ -1.67
CDCA3-209ENST00000544610 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 DKK2Q9UBU2 259 aa4.64□□□□□ -1.67
CDCA3-209ENST00000544610 TRGV1A0A0A0MS02 117 aa4.63□□□□□ -1.67
CDCA3-209ENST00000544610 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms