RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MAP1LC3CQ9BXW4 147 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 NPVFQ9HCQ7 196 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 TNFSF18Q9UNG2 199 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 PXMP4Q9Y6I8 212 aa3.95□□□□□ -1.78
CPSF7-222ENST00000544585 TRGV4A0A0C4DH28 118 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 C9orf170A2RU37 121 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 C7orf71A4D174 169 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 LINC00869P0C866 280 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 IAPPP10997 89 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 GUK1Q16774 197 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 LINC01556Q5JQF7 62 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 ALKAL2Q6UX46 152 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 PARD6GQ9BYG4 376 aaPredicted RBP3.94□□□□□ -1.78
CPSF7-222ENST00000544585 ARV1Q9H2C2 271 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 KLF12Q9Y4X4 402 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 V9GYY9 64 aa3.94□□□□□ -1.78
CPSF7-222ENST00000544585 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 C9JCJ5 164 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 FNDC10F2Z333 226 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 NDUFS6O75380 124 aaKnown RBP3.93□□□□□ -1.78
CPSF7-222ENST00000544585 SCO1O75880 301 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 IGHV3-53P01767 116 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 GPX1P07203 203 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 EIF5AP63241 154 aaKnown RBP3.93□□□□□ -1.78
CPSF7-222ENST00000544585 PPP1R1AQ13522 171 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 ATP6V1FQ16864 119 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 TMEM128Q5BJH2 165 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 SPANXN5Q5MJ07 72 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 LINC00305Q7Z4B0 112 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 STOML3Q8TAV4 291 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 PPP1R1CQ8WVI7 109 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 NMES1Q9C002 83 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 SLC25A31Q9H0C2 315 aa3.93□□□□□ -1.78
CPSF7-222ENST00000544585 LINC00587B1AMM8 73 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 KLLNB2CW77 178 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 F8W036 122 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 K7EPK0 472 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 PFN1P07737 140 aaKnown RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 PET100P0DJ07 73 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 TPT1P13693 172 aaKnown RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 CRISP2P16562 243 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 RNASE4P34096 147 aaKnown RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 BTN1A1Q13410 526 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 ZNF266Q14584 549 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 EIF5AL1Q6IS14 154 aaKnown RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 OR10G4Q8NGN3 311 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 BLNKQ8WV28 456 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 CHAC1Q9BUX1 264 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 ZNF471Q9BX82 626 aaPredicted RBP3.92□□□□□ -1.78
CPSF7-222ENST00000544585 SH3BGRL3Q9H299 93 aa3.92□□□□□ -1.78
CPSF7-222ENST00000544585 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 TAAR5O14804 337 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 SFT2D2O95562 160 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 IGLV2-8P01709 118 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
CPSF7-222ENST00000544585 COTL1Q14019 142 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 C10orf113Q5VZT2 155 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 Q8N976 141 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 OR10P1Q8NGE3 313 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 SMIM8Q96KF7 97 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 FAM19A4Q96LR4 140 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 C2orf50Q96LR7 162 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 AGPAT4-IT1Q9H0P7 198 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
CPSF7-222ENST00000544585 PSENENQ9NZ42 101 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 TP53TG3Q9ULZ0 132 aa3.91□□□□□ -1.78
CPSF7-222ENST00000544585 TMEM218A2RU14 115 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 RBFOX3A6NFN3 312 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 H3BQ15 152 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 H7C1H1 209 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 COX7A2P2O60397 106 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 IGLC2P0DOY2 106 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 HIST1H1EP10412 219 aaKnown RBP3.9□□□□□ -1.79
CPSF7-222ENST00000544585 PFN2P35080 140 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 CTRLP40313 264 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 FLI1Q01543 452 aaPredicted RBP3.9□□□□□ -1.79
CPSF7-222ENST00000544585 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 OR10J3Q5JRS4 329 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 TMEM78Q5T7P6 136 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 SVBPQ8N300 66 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 CIRBP-AS1Q8TBR5 109 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 AQP10Q96PS8 301 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 C12orf57Q99622 126 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 GGACTQ9BVM4 153 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 SLC25A2Q9BXI2 301 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 RPS10P5Q9NQ39 176 aa3.9□□□□□ -1.79
CPSF7-222ENST00000544585 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
CPSF7-222ENST00000544585 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
CPSF7-222ENST00000544585 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
CPSF7-222ENST00000544585 SLC17A3O00476 420 aa3.89□□□□□ -1.79
CPSF7-222ENST00000544585 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
CPSF7-222ENST00000544585 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
CPSF7-222ENST00000544585 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms