RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 VAX2Q9UIW0 290 aa8.96□□□□□ -0.98
SEMA4D-224ENST00000544513 SMLR1H3BR10 107 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 PAGE4O60829 102 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 CRPP02741 224 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 PRSS1P07477 247 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 PKIAP61925 76 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 DGAT2L7PQ6IED9 249 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 ZNF471Q9BX82 626 aaPredicted RBP8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
SEMA4D-224ENST00000544513 HMSDA8MTL9 139 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 ARPC5O15511 151 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 ANGP03950 147 aaKnown RBP8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 ZNF56Q15929 161 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 MBD3L1Q8WWY6 194 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 CHCHD5Q9BSY4 110 aa8.94□□□□□ -0.98
SEMA4D-224ENST00000544513 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
SEMA4D-224ENST00000544513 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
SEMA4D-224ENST00000544513 RBX1P62877 108 aa8.93□□□□□ -0.98
SEMA4D-224ENST00000544513 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
SEMA4D-224ENST00000544513 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
SEMA4D-224ENST00000544513 MUC21A0A0G2JKD1 596 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 MUC21A0A140T8X8 626 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 HLA-DQA1P01909 254 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 ZNF345Q14585 488 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
SEMA4D-224ENST00000544513 A0A0D9SG52 128 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 F5H697 171 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 PANO1I0J062 215 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 SPANXN1Q5VSR9 72 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 LINC00269Q8N2A0 174 aa8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
SEMA4D-224ENST00000544513 UMAD1C9J7I0 102 aa8.9□□□□□ -0.98
SEMA4D-224ENST00000544513 IQCJQ1A5X6 159 aa8.9□□□□□ -0.98
SEMA4D-224ENST00000544513 KCNRGQ8N5I3 272 aa8.9□□□□□ -0.98
SEMA4D-224ENST00000544513 DERL1Q9BUN8 251 aa8.9□□□□□ -0.98
SEMA4D-224ENST00000544513 TNXBP22105 4242 aa8.9□□□□□ -0.98
SEMA4D-224ENST00000544513 TRBV25-1A0A075B6N4 114 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 M0QY20 66 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 GAGE6Q13070 117 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 CIRBPQ14011 172 aaKnown RBP8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 TMUB2Q71RG4 321 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 FAM213BQ8TBF2 198 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
SEMA4D-224ENST00000544513 KANTRA0A1W2PQU2 76 aa8.88□□□□□ -0.99
SEMA4D-224ENST00000544513 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
SEMA4D-224ENST00000544513 A0A1B0GV50 99 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 MT1HL1P0DM35 61 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 RPL35P42766 123 aaKnown RBP8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 SSTP61278 116 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 REG3AQ06141 175 aa8.87□□□□□ -0.99
SEMA4D-224ENST00000544513 IGHV1-24A0A0C4DH33 117 aa8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 A0A1B0GUV1 79 aa8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 BCL2L11O43521 198 aa8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 EIF5AP63241 154 aaKnown RBP8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 C11orf52Q96A22 123 aa8.86□□□□□ -0.99
SEMA4D-224ENST00000544513 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 P01737 135 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 SLPIP03973 132 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 SUMO4Q6EEV6 95 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 C9orf62Q8N4C0 152 aa8.85□□□□□ -0.99
SEMA4D-224ENST00000544513 IGLV10-54A0A075B6I4 117 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 H7C1H1 209 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 GZMBP10144 247 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 NKX2-5P52952 324 aaPredicted RBP8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 CCL20P78556 96 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
SEMA4D-224ENST00000544513 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 CACNG7P62955 275 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 Q6ZRU5 148 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 FER1L6-AS1Q8NA97 138 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 PGLYRP4Q96LB8 373 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 TMEM243Q9BU79 118 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 MANBALQ9NQG1 85 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 LRP2P98164 4655 aa8.83□□□□□ -1
SEMA4D-224ENST00000544513 hDV102S1A0JD36 115 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 MGPP08493 103 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 RPS20P60866 119 aaKnown RBP8.82□□□□□ -1
SEMA4D-224ENST00000544513 CENPWQ5EE01 88 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 RASL11AQ6T310 242 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 SLC51BQ86UW2 128 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 RNF185Q96GF1 192 aa8.82□□□□□ -1
SEMA4D-224ENST00000544513 IGHV3-64A0A075B6Q5 118 aa8.81□□□□□ -1
SEMA4D-224ENST00000544513 F2Z2F3 143 aa8.81□□□□□ -1
SEMA4D-224ENST00000544513 EIF5AL1Q6IS14 154 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms