RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 IGHV4-61A0A0C4DH41 118 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 BLCAPP62952 87 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 Q8N9L7 120 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 PROK2Q9HC23 129 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 FAM215AQ9Y5M1 114 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 COL4A4P53420 1690 aaPredicted RBP7.95□□□□□ -1.14
PCDH9-204ENST00000544246 MPDZO75970 2070 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 TDRG1Q3Y452 100 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 RITA1Q96K30 269 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 TRBV10-1A0A0K0K1A3 114 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 LINC00269Q8N2A0 174 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 WT1P19544 449 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-204ENST00000544246 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 TMEM89A2RUT3 159 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 KIAA1671Q9BY89 1806 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 CRYGDP07320 174 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 MYO7BQ6PIF6 2116 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 PATE2Q6UY27 113 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 C9orf85Q96MD7 179 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 FANCMQ8IYD8 2048 aa7.94□□□□□ -1.14
PCDH9-204ENST00000544246 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-204ENST00000544246 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
PCDH9-204ENST00000544246 INSL3P51460 131 aa7.93□□□□□ -1.14
PCDH9-204ENST00000544246 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-204ENST00000544246 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
PCDH9-204ENST00000544246 SLPIP03973 132 aa7.93□□□□□ -1.14
PCDH9-204ENST00000544246 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
PCDH9-204ENST00000544246 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
PCDH9-204ENST00000544246 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
PCDH9-204ENST00000544246 LOXL1Q08397 574 aaPredicted RBP7.92□□□□□ -1.14
PCDH9-204ENST00000544246 H7C423 109 aa7.92□□□□□ -1.14
PCDH9-204ENST00000544246 TNRC6BQ9UPQ9 1833 aaKnown RBP7.92□□□□□ -1.14
PCDH9-204ENST00000544246 NOTCH4Q99466 2003 aa7.92□□□□□ -1.14
PCDH9-204ENST00000544246 NUP210Q8TEM1 1887 aaPredicted RBP7.92□□□□□ -1.14
PCDH9-204ENST00000544246 LYRM9A8MSI8 78 aa7.92□□□□□ -1.14
PCDH9-204ENST00000544246 RTTNQ86VV8 2226 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 LY6G6EA0A0G2JKS1 128 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 TIMM17BO60830 172 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 IGLV3-1P01715 115 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 C11orf53Q8IXP5 236 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 SNURFQ9Y675 71 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 U3KQA8 63 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 KMT2EQ8IZD2 1858 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 WDR81Q562E7 1941 aa7.91□□□□□ -1.14
PCDH9-204ENST00000544246 C1orf158Q8N1D5 194 aa7.9□□□□□ -1.14
PCDH9-204ENST00000544246 MAP6D1Q9H9H5 199 aa7.9□□□□□ -1.14
PCDH9-204ENST00000544246 CCKP06307 115 aa7.9□□□□□ -1.14
PCDH9-204ENST00000544246 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.14
PCDH9-204ENST00000544246 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
PCDH9-204ENST00000544246 YLPM1P49750 1951 aaKnown RBP7.9□□□□□ -1.14
PCDH9-204ENST00000544246 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 HILS1P60008 231 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 SERP2Q8N6R1 65 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 ZNF318Q5VUA4 2279 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 NBASA2RRP1 2371 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 UBE2D3P61077 147 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 C2orf16Q68DN1 1984 aa7.9□□□□□ -1.15
PCDH9-204ENST00000544246 A0A0J9YX75 114 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 C3orf84H3BNL1 204 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 IGF2-ASQ6U949 168 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 HRCT1Q6UXD1 115 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 RSPO1Q2MKA7 263 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-204ENST00000544246 SPRNQ5BIV9 151 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 FREM3P0C091 2139 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 IGHV4-30-4P0DP06 118 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 IGHV4-31P0DP07 118 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 GRNP28799 593 aaKnown RBP7.89□□□□□ -1.15
PCDH9-204ENST00000544246 KIF26BQ2KJY2 2108 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 C20orf173Q96LM9 149 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 SPRY4Q9C004 299 aa7.89□□□□□ -1.15
PCDH9-204ENST00000544246 IBA57-AS1B1ANH7 110 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 NDUFA7O95182 113 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 DOCK9Q9BZ29 2069 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 P0DMU3 169 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 FAM222AQ5U5X8 452 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 PRORYQ9H606 182 aa7.88□□□□□ -1.15
PCDH9-204ENST00000544246 DEFB1P60022 68 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-204ENST00000544246 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 ABCA4P78363 2273 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 PRR4Q16378 134 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
PCDH9-204ENST00000544246 Q6ZVQ6 151 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 DCANP1Q8TF63 244 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 LINC00467Q9BRT7 94 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 SDK2Q58EX2 2172 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 KIF26AQ9ULI4 1882 aaPredicted RBP7.86□□□□□ -1.15
PCDH9-204ENST00000544246 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
PCDH9-204ENST00000544246 DEFB131BA0A096LNP1 70 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms