RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZNF345Q14585 488 aa7.82□□□□□ -1.16
GABPB1-206ENST00000543881 NIT1Q86X76 327 aa7.82□□□□□ -1.16
GABPB1-206ENST00000543881 FAM213BQ8TBF2 198 aa7.82□□□□□ -1.16
GABPB1-206ENST00000543881 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
GABPB1-206ENST00000543881 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 SCO2A0A1W2PP80 73 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 C5orf52A6NGY3 159 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 SEC11BP0C7V7 166 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 RPL19P84098 196 aaKnown RBP7.81□□□□□ -1.16
GABPB1-206ENST00000543881 Q6ZSA8 131 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 ZFP82Q8N141 532 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 MLST8Q9BVC4 326 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 NIT2Q9NQR4 276 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 TEX46H3BTG2 121 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
GABPB1-206ENST00000543881 LRP1Q07954 4544 aaKnown RBP7.8□□□□□ -1.16
GABPB1-206ENST00000543881 HMSDA8MTL9 139 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 UMAD1C9J7I0 102 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 OXTP01178 125 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 UBE2D3P61077 147 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 UBE2D2P62837 147 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 COTL1Q14019 142 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 C10orf91Q5T1B1 145 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 OR10AG1Q8NH19 301 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 KLK12Q9UKR0 248 aa7.8□□□□□ -1.16
GABPB1-206ENST00000543881 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.79□□□□□ -1.16
GABPB1-206ENST00000543881 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 TRBV10-1A0A0K0K1A3 114 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 BCL2L11O43521 198 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 PCP4P48539 62 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 RAB5BP61020 215 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 FAM74A3Q4VXF1 159 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 ATRAIDQ6UW56 229 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 BAGE2Q86Y30 109 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 SVBPQ8N300 66 aa7.79□□□□□ -1.16
GABPB1-206ENST00000543881 ZNF471Q9BX82 626 aaPredicted RBP7.79□□□□□ -1.16
GABPB1-206ENST00000543881 A0A0D9SG52 128 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 MUC21A0A0G2JKD1 596 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 MUC21A0A140T8X8 626 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 CXCL1P09341 107 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 RPL36AP83881 106 aaKnown RBP7.78□□□□□ -1.16
GABPB1-206ENST00000543881 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 OR10G8Q8NGN5 311 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 RPL36ALQ969Q0 106 aaKnown RBP7.78□□□□□ -1.16
GABPB1-206ENST00000543881 SSBP4Q9BWG4 385 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-206ENST00000543881 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
GABPB1-206ENST00000543881 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
GABPB1-206ENST00000543881 URGCP-MRPS24S4R325 110 aa7.78□□□□□ -1.16
GABPB1-206ENST00000543881 IGKV2D-24A0A075B6R9 120 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 KANTRA0A1W2PQU2 76 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 SNAI2O43623 268 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 APOC3P02656 99 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
GABPB1-206ENST00000543881 CCL20P78556 96 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 PRR27Q6MZM9 219 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
GABPB1-206ENST00000543881 A0A087WX48 190 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 ZNF56Q15929 161 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 SCXQ7RTU7 201 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 UBE2WQ96B02 151 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 COX11Q9Y6N1 276 aa7.76□□□□□ -1.17
GABPB1-206ENST00000543881 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 RMI2Q96E14 147 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 C14orf144Q96I85 54 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 TMEM218A2RU14 115 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 GNG13Q9P2W3 67 aa7.75□□□□□ -1.17
GABPB1-206ENST00000543881 RBFOX3A6NFN3 312 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 TMEM262E9PQX1 116 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 IGLV2-8P01709 118 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 ELOBQ15370 118 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 MPV17L2Q567V2 206 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 SPANXN1Q5VSR9 72 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 NTM-AS1Q6ZSK4 140 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 C15orf54Q8N8G6 183 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 Q8N976 141 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 C11orf52Q96A22 123 aa7.74□□□□□ -1.17
GABPB1-206ENST00000543881 A0A1B0GV90 55 aa7.73□□□□□ -1.17
GABPB1-206ENST00000543881 C1orf196B1AJZ1 125 aa7.73□□□□□ -1.17
GABPB1-206ENST00000543881 LINC00614P0C842 121 aa7.73□□□□□ -1.17
GABPB1-206ENST00000543881 GZMBP10144 247 aa7.73□□□□□ -1.17
GABPB1-206ENST00000543881 EIF5AP63241 154 aaKnown RBP7.73□□□□□ -1.17
GABPB1-206ENST00000543881 TRAV1-1A0A0B4J248 108 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 F5H697 171 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 TCAPO15273 167 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 Q0VG73 95 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 CENPWQ5EE01 88 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 KCNIP4Q6PIL6 250 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 CHAC1Q9BUX1 264 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 MANBALQ9NQG1 85 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 VAX2Q9UIW0 290 aa7.72□□□□□ -1.17
GABPB1-206ENST00000543881 C19orf71A6NCJ1 209 aa7.71□□□□□ -1.18
GABPB1-206ENST00000543881 IGLC6P0CF74 106 aa7.71□□□□□ -1.18
GABPB1-206ENST00000543881 RAB5CP51148 216 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms