RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 AP5S1Q9NUS5 200 aa7.34□□□□□ -1.23
COPA-205ENST00000541366 SH2D1AO60880 128 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 RPL12P30050 165 aaKnown RBP7.33□□□□□ -1.24
COPA-205ENST00000541366 ZNF56Q15929 161 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 STPG4Q8N801 248 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 PPP1R1CQ8WVI7 109 aa7.33□□□□□ -1.24
COPA-205ENST00000541366 FAM240BA0A1B0GVZ2 78 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 H2BFSP57053 126 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 DEFA3P59666 94 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 SRSF9Q13242 221 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPA-205ENST00000541366 PRR27Q6MZM9 219 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 Q86TA4 180 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 ZFP82Q8N141 532 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
COPA-205ENST00000541366 MPC2O95563 127 aa7.31□□□□□ -1.24
COPA-205ENST00000541366 RAB4BP61018 213 aa7.31□□□□□ -1.24
COPA-205ENST00000541366 PKIAP61925 76 aa7.31□□□□□ -1.24
COPA-205ENST00000541366 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
COPA-205ENST00000541366 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
COPA-205ENST00000541366 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 TRBV6-1A0A0K0K1D8 114 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 HIGD2BQ4VC39 106 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 VAX2Q9UIW0 290 aa7.3□□□□□ -1.24
COPA-205ENST00000541366 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 A0A096LNI7 61 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 NDUFS6O75380 124 aaKnown RBP7.29□□□□□ -1.24
COPA-205ENST00000541366 IFNA7P01567 189 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 RPS10P46783 165 aaKnown RBP7.29□□□□□ -1.24
COPA-205ENST00000541366 UBE2G2P60604 165 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 CYCSP99999 105 aaKnown RBP7.29□□□□□ -1.24
COPA-205ENST00000541366 FAM162BQ5T6X4 162 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 INO80EQ8NBZ0 244 aaPredicted RBP7.29□□□□□ -1.24
COPA-205ENST00000541366 TMEM167BQ9NRX6 74 aa7.29□□□□□ -1.24
COPA-205ENST00000541366 F5H697 171 aa7.28□□□□□ -1.24
COPA-205ENST00000541366 PEX7O00628 323 aa7.28□□□□□ -1.24
COPA-205ENST00000541366 SSTP61278 116 aa7.28□□□□□ -1.24
COPA-205ENST00000541366 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
COPA-205ENST00000541366 TRAV8-4A0A0B4J246 113 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 A0A1W2PRE2 83 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 H7C1H1 209 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 CXorf1O96002 111 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 P01737 135 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 ZNF674Q2M3X9 581 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
COPA-205ENST00000541366 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
COPA-205ENST00000541366 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
COPA-205ENST00000541366 COX8CQ7Z4L0 72 aa7.26□□□□□ -1.25
COPA-205ENST00000541366 ATP6V0CP27449 155 aa7.25□□□□□ -1.25
COPA-205ENST00000541366 ZNF726P1Q15940 193 aa7.25□□□□□ -1.25
COPA-205ENST00000541366 Q6ZRP5 223 aa7.25□□□□□ -1.25
COPA-205ENST00000541366 IGKV3OR2-268A0A0C4DH90 116 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 PET100P0DJ07 73 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 GZMBP10144 247 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 MZT2BQ6NZ67 158 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 AQP10Q96PS8 301 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 ZNF471Q9BX82 626 aaPredicted RBP7.24□□□□□ -1.25
COPA-205ENST00000541366 ACTR3CQ9C0K3 210 aaPredicted RBP7.24□□□□□ -1.25
COPA-205ENST00000541366 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
COPA-205ENST00000541366 A0A1B0GUV1 79 aa7.23□□□□□ -1.25
COPA-205ENST00000541366 FAM74A7A6NL05 159 aa7.23□□□□□ -1.25
COPA-205ENST00000541366 SULT1A2P50226 295 aa7.23□□□□□ -1.25
COPA-205ENST00000541366 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
COPA-205ENST00000541366 PSMG3Q9BT73 122 aaPredicted RBP7.23□□□□□ -1.25
COPA-205ENST00000541366 CCDC32Q9BV29 185 aa7.23□□□□□ -1.25
COPA-205ENST00000541366 FAM231BA6NCW3 169 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 LTAP01374 205 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 UBE2G1P62253 170 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 CFAP161Q6P656 301 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 ENKURQ8TC29 256 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 TMEM243Q9BU79 118 aa7.22□□□□□ -1.25
COPA-205ENST00000541366 INMT-MINDY4F8WBC2 141 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 M0QY20 66 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 SNAI2O43623 268 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 SSNA1O43805 119 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 MBP02144 154 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 NKX2-5P52952 324 aaPredicted RBP7.21□□□□□ -1.26
COPA-205ENST00000541366 FMC1Q96HJ9 113 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 TNFSF18Q9UNG2 199 aa7.21□□□□□ -1.26
COPA-205ENST00000541366 MGPP08493 103 aa7.2□□□□□ -1.26
COPA-205ENST00000541366 SERF2P84101 59 aa7.2□□□□□ -1.26
COPA-205ENST00000541366 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
COPA-205ENST00000541366 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
COPA-205ENST00000541366 A0A0U1RQV1 116 aa7.19□□□□□ -1.26
COPA-205ENST00000541366 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
COPA-205ENST00000541366 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
COPA-205ENST00000541366 CTXND1A0A1B0GTU2 59 aa7.18□□□□□ -1.26
COPA-205ENST00000541366 UBE2L6O14933 153 aa7.18□□□□□ -1.26
COPA-205ENST00000541366 OR5AL1P0C617 328 aa7.18□□□□□ -1.26
COPA-205ENST00000541366 PRR4Q16378 134 aa7.18□□□□□ -1.26
COPA-205ENST00000541366 AP1S3Q96PC3 154 aa7.18□□□□□ -1.26
COPA-205ENST00000541366 PSORS1C2Q9UIG4 136 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms