RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 Q6ZUT4 128 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 WFDC3Q8IUB2 231 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 BAALCQ8WXS3 180 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 C16orf92Q96LL3 132 aa7.87□□□□□ -1.15
CHFR-219ENST00000541341 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 PRSS29PA6NIE9 313 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 IGHV1-69P01742 117 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 GAGE5Q13069 117 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 GAGE6Q13070 117 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 RHOHQ15669 191 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 ATXN8Q156A1 80 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 NDUFA11Q86Y39 141 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 WFDC12Q8WWY7 111 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 RNF183Q96D59 192 aa7.86□□□□□ -1.15
CHFR-219ENST00000541341 SDHAF1A6NFY7 115 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 SNCGO76070 127 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 NXPH4O95158 308 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 ARL3P36405 182 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 ID1P41134 155 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 DLX1P56177 255 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 PRB3Q04118 309 aaPredicted RBP7.85□□□□□ -1.15
CHFR-219ENST00000541341 APRG1Q8IVJ8 170 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 USMG5Q96IX5 58 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 ANAPC13Q9BS18 74 aa7.85□□□□□ -1.15
CHFR-219ENST00000541341 IGHV7-81A0A0B4J1V7 117 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 NDUFA4O00483 81 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 TSPAN13O95857 204 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 CD7P09564 240 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 CRIP2P52943 208 aaPredicted RBP7.84□□□□□ -1.15
CHFR-219ENST00000541341 ZNF575Q86XF7 245 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 AJUBAQ96IF1 538 aa7.84□□□□□ -1.15
CHFR-219ENST00000541341 A0A0J9YY99 117 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 M0R2P5 195 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 NPFFO15130 113 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 LEPROTO15243 131 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 GAGE2BQ13066 116 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 RASL10AQ92737 203 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 ODF3Q96PU9 254 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
CHFR-219ENST00000541341 H3BVH4 76 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 IGHV4-59P01825 116 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 PRB2P02812 416 aaPredicted RBP7.82□□□□□ -1.16
CHFR-219ENST00000541341 TRGV3P03979 118 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 ACYP1P07311 99 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 SAA4P35542 130 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 RPL13AP40429 203 aaKnown RBP7.82□□□□□ -1.16
CHFR-219ENST00000541341 AMTNQ6UX39 209 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 Q6YL49 198 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 Q8N9W7 124 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 PLXNB1O43157 2135 aa7.82□□□□□ -1.16
CHFR-219ENST00000541341 TRAV26-1A0A087WT03 109 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 FAM240AA0A1B0GVK7 77 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 CLPSL1A2RUU4 121 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 H3BT86 120 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 J3QQQ9 107 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 SLC25A20O43772 301 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 CFC1BP0CG36 223 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 CFC1P0CG37 223 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 GATA1P15976 413 aaPredicted RBP7.81□□□□□ -1.16
CHFR-219ENST00000541341 FAM159AQ6UWV7 190 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 CITED1Q99966 193 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 TTTY13Q9BZ97 58 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 NOTCH1P46531 2555 aa7.81□□□□□ -1.16
CHFR-219ENST00000541341 TRAV8-2A0A0B4J237 113 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 TRBV30A0A0K0K1B3 111 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 IGIPA6NJ69 53 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 PRAC2D3DTV9 90 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 RHODO00212 210 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 MGPP08493 103 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 PPIFP30405 207 aaKnown RBP7.8□□□□□ -1.16
CHFR-219ENST00000541341 POLR2KP53803 58 aaKnown RBP7.8□□□□□ -1.16
CHFR-219ENST00000541341 NSUN5P1Q3KNT7 163 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 ZNF876PQ49A33 203 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 ZFP2Q6ZN57 461 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 TRPT1Q86TN4 253 aaKnown RBP7.8□□□□□ -1.16
CHFR-219ENST00000541341 ANKRD29Q8N6D5 301 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 RAX2Q96IS3 184 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
CHFR-219ENST00000541341 AGRNO00468 2067 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 LGALS9O00182 355 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 CLEC19AQ6UXS0 136 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 C11orf44Q8N8P7 122 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 LINC01006Q8NI28 216 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
CHFR-219ENST00000541341 C11orf21Q9P2W6 132 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms