RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 GTF3C1Q12789 2109 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 Q6ZQT7 251 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 Q9HAA7 133 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 IGHV4-59P01825 116 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 GYPEP15421 78 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 DEFB105AQ8NG35 78 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 CACNA1GO43497 2377 aa11.38□□□□□ -0.59
SMARCA4-207ENST00000541122 TRIAP1O43715 76 aa11.37□□□□□ -0.59
SMARCA4-207ENST00000541122 NDUFA7O95182 113 aa11.37□□□□□ -0.59
SMARCA4-207ENST00000541122 BRK1Q8WUW1 75 aa11.37□□□□□ -0.59
SMARCA4-207ENST00000541122 NCOA6Q14686 2063 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-207ENST00000541122 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
SMARCA4-207ENST00000541122 Q6Q795 121 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 APRG1Q8IVJ8 170 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 IGF2-ASQ6U949 168 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 Q8N976 141 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 PIP4P1Q86T03 277 aa11.36□□□□□ -0.59
SMARCA4-207ENST00000541122 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 NACAE9PAV3 2078 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 NDUFA1O15239 70 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 CRIP1P50238 77 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 SPTBN2O15020 2390 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 TRAV23DV6A0A075B6W5 121 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 TIMM17BO60830 172 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 LINC00310P59036 64 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 TNRC6BQ9UPQ9 1833 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 CCL24O00175 119 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 MSMPQ1L6U9 139 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
SMARCA4-207ENST00000541122 TRBV12-3P01733 135 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 SLURP1P55000 103 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 ATP5EP56381 51 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 MRPS12O15235 138 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 KIAA1549LQ6ZVL6 1849 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 NCR3O14931 201 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 UBE2BP63146 152 aa11.34□□□□□ -0.59
SMARCA4-207ENST00000541122 IGLV2-11P01706 119 aa11.33□□□□□ -0.59
SMARCA4-207ENST00000541122 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.59
SMARCA4-207ENST00000541122 BLCAPP62952 87 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 IGHV4-4A0A075B6R2 117 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 NDUFB1O75438 58 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 XGP55808 180 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 IGLV4-3A0A075B6K6 122 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 LINC00308Q8TCZ7 52 aa11.33□□□□□ -0.6
SMARCA4-207ENST00000541122 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 IGKV2D-24A0A075B6R9 120 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 SEM1Q6ZVN7 128 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 SP5Q6BEB4 398 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
SMARCA4-207ENST00000541122 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 C1orf229Q6ZS94 237 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 A0A087WW49 117 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 TIRAPP58753 221 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 IGHV4-38-2P0DP08 117 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 UNQ9165/PRO28630Q6UXU0 137 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 TRBV6-5A0A0K0K1A5 114 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 NDUFC1O43677 76 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 NDUFS5O43920 106 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 FAM222AQ5U5X8 452 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 Q96MF0 132 aa11.31□□□□□ -0.6
SMARCA4-207ENST00000541122 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 PYGO1Q9Y3Y4 419 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 KIF26AQ9ULI4 1882 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 H7C423 109 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 GPR179Q6PRD1 2367 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 FSTL3O95633 263 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 IGHV4-28A0A0C4DH34 117 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 LST1O00453 97 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 COX7CP15954 63 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 COX7BP24311 80 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 MAPK1IP1LQ8NDC0 245 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 TMEM131Q92545 1883 aa11.3□□□□□ -0.6
SMARCA4-207ENST00000541122 DEFB1P60022 68 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 IGLV10-54A0A075B6I4 117 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 TRBV27A0A0K0K1C4 114 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 ADAMTS9Q9P2N4 1935 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 FAM240AA0A1B0GVK7 77 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 NRACQ8N912 160 aa11.29□□□□□ -0.6
SMARCA4-207ENST00000541122 CDKN2A-AS1Q9UH64 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms