RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 OR5AL1P0C617 328 aa9.45□□□□□ -0.9
MSRB3-209ENST00000540804 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
MSRB3-209ENST00000540804 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
MSRB3-209ENST00000540804 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
MSRB3-209ENST00000540804 ELOBQ15370 118 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 CHCHD7Q9BUK0 85 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
MSRB3-209ENST00000540804 GAGE6Q13070 117 aa9.43□□□□□ -0.9
MSRB3-209ENST00000540804 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
MSRB3-209ENST00000540804 C11orf52Q96A22 123 aa9.43□□□□□ -0.9
MSRB3-209ENST00000540804 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
MSRB3-209ENST00000540804 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
MSRB3-209ENST00000540804 MGPP08493 103 aa9.42□□□□□ -0.9
MSRB3-209ENST00000540804 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
MSRB3-209ENST00000540804 MANBALQ9NQG1 85 aa9.42□□□□□ -0.9
MSRB3-209ENST00000540804 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 CRPP02741 224 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 EIF5AP63241 154 aaKnown RBP9.41□□□□□ -0.9
MSRB3-209ENST00000540804 Q0VG73 95 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
MSRB3-209ENST00000540804 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.9
MSRB3-209ENST00000540804 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.9
MSRB3-209ENST00000540804 SMIM17P0DL12 118 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 RBX1P62877 108 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 AP1S3Q96PC3 154 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
MSRB3-209ENST00000540804 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.91
MSRB3-209ENST00000540804 PKHD1L1Q86WI1 4243 aa9.39□□□□□ -0.91
MSRB3-209ENST00000540804 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
MSRB3-209ENST00000540804 J3QL48 77 aa9.39□□□□□ -0.91
MSRB3-209ENST00000540804 M0QY20 66 aa9.39□□□□□ -0.91
MSRB3-209ENST00000540804 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
MSRB3-209ENST00000540804 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
MSRB3-209ENST00000540804 DAZAP1Q96EP5 407 aaKnown RBP9.39□□□□□ -0.91
MSRB3-209ENST00000540804 PRSS1P07477 247 aa9.38□□□□□ -0.91
MSRB3-209ENST00000540804 GNG4P50150 75 aa9.38□□□□□ -0.91
MSRB3-209ENST00000540804 SULT1A2P50226 295 aa9.38□□□□□ -0.91
MSRB3-209ENST00000540804 NKX2-5P52952 324 aaPredicted RBP9.38□□□□□ -0.91
MSRB3-209ENST00000540804 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
MSRB3-209ENST00000540804 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
MSRB3-209ENST00000540804 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
MSRB3-209ENST00000540804 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
MSRB3-209ENST00000540804 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
MSRB3-209ENST00000540804 MED9Q9NWA0 146 aa9.37□□□□□ -0.91
MSRB3-209ENST00000540804 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 RAB5CP51148 216 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 MIAQ16674 131 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
MSRB3-209ENST00000540804 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 PANO1I0J062 215 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 P01737 135 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 NTF3P20783 257 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 RPS20P60866 119 aaKnown RBP9.35□□□□□ -0.91
MSRB3-209ENST00000540804 C14orf177Q52M58 125 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 NUDT10Q8NFP7 164 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 NUDT11Q96G61 164 aa9.35□□□□□ -0.91
MSRB3-209ENST00000540804 PDE6DO43924 150 aa9.34□□□□□ -0.91
MSRB3-209ENST00000540804 IFNA1P01562 189 aa9.34□□□□□ -0.91
MSRB3-209ENST00000540804 BCL2P10415 239 aa9.34□□□□□ -0.91
MSRB3-209ENST00000540804 CACNG7P62955 275 aa9.34□□□□□ -0.91
MSRB3-209ENST00000540804 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
MSRB3-209ENST00000540804 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
MSRB3-209ENST00000540804 TEX46H3BTG2 121 aa9.33□□□□□ -0.92
MSRB3-209ENST00000540804 K7EN84 100 aa9.33□□□□□ -0.92
MSRB3-209ENST00000540804 PKIAP61925 76 aa9.33□□□□□ -0.92
MSRB3-209ENST00000540804 REG3AQ06141 175 aa9.33□□□□□ -0.92
MSRB3-209ENST00000540804 EIF5AL1Q6IS14 154 aaKnown RBP9.33□□□□□ -0.92
MSRB3-209ENST00000540804 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
MSRB3-209ENST00000540804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
MSRB3-209ENST00000540804 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
MSRB3-209ENST00000540804 H7C1H1 209 aa9.32□□□□□ -0.92
MSRB3-209ENST00000540804 TCTE3Q8IZS6 198 aa9.32□□□□□ -0.92
MSRB3-209ENST00000540804 SMIM12Q96EX1 92 aa9.32□□□□□ -0.92
MSRB3-209ENST00000540804 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
MSRB3-209ENST00000540804 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 F2Z2F3 143 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
MSRB3-209ENST00000540804 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
MSRB3-209ENST00000540804 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 C9orf62Q8N4C0 152 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
MSRB3-209ENST00000540804 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms