RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.29	□□□□□ -0.28
RAP1B-222	ENST00000540781	KRTAP17-1	Q9BYP8	105 aa		13.29	□□□□□ -0.28
RAP1B-222	ENST00000540781		A0A087WX48	190 aa		13.28	□□□□□ -0.28
RAP1B-222	ENST00000540781		K7EN84	100 aa		13.28	□□□□□ -0.28
RAP1B-222	ENST00000540781	RNASE7	Q9H1E1	156 aa	Known RBP	13.28	□□□□□ -0.28
RAP1B-222	ENST00000540781	HSPG2	P98160	4391 aa		13.28	□□□□□ -0.28
RAP1B-222	ENST00000540781	TRBV6-8	A0A0A6YYG3	113 aa		13.27	□□□□□ -0.29
RAP1B-222	ENST00000540781	KCNIP4	Q6PIL6	250 aa		13.27	□□□□□ -0.29
RAP1B-222	ENST00000540781	MAPKAPK5-AS1	Q8N8E1	139 aa		13.27	□□□□□ -0.29
RAP1B-222	ENST00000540781	CHCHD7	Q9BUK0	85 aa		13.27	□□□□□ -0.29
RAP1B-222	ENST00000540781	RPP21	Q9H633	154 aa	Known RBP	13.27	□□□□□ -0.29
RAP1B-222	ENST00000540781	APOB	P04114	4563 aa	Known RBP	13.26	□□□□□ -0.29
RAP1B-222	ENST00000540781	TRGC1	P0CF51	173 aa		13.26	□□□□□ -0.29
RAP1B-222	ENST00000540781	CEBPG	P53567	150 aa		13.26	□□□□□ -0.29
RAP1B-222	ENST00000540781	KLK12	Q9UKR0	248 aa		13.26	□□□□□ -0.29
RAP1B-222	ENST00000540781	TMEM262	E9PQX1	116 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781		H7C1H1	209 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	NTF3	P20783	257 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	ELOB	Q15370	118 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	SUMO4	Q6EEV6	95 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	WDR73	Q6P4I2	378 aa		13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	EIF5A2	Q9GZV4	153 aa	Known RBP	13.25	□□□□□ -0.29
RAP1B-222	ENST00000540781	PCLO	Q9Y6V0	5065 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781		M0QY20	66 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781	CTRL	P40313	264 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781	TMEM97	Q5BJF2	176 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781	RMI2	Q96E14	147 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781	DNAJC30	Q96LL9	226 aa		13.24	□□□□□ -0.29
RAP1B-222	ENST00000540781	IGLV5-52	A0A0A0MRZ9	124 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	GCSH	P23434	173 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	KRTAP10-1	P60331	282 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781		Q8N814	137 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	NTN5	Q8WTR8	489 aa	Predicted RBP	13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	UBE2W	Q96B02	151 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	CHCHD5	Q9BSY4	110 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	KRTAP4-5	Q9BYR2	181 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	DPH3P1	Q9H4G8	78 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	COX11	Q9Y6N1	276 aa		13.23	□□□□□ -0.29
RAP1B-222	ENST00000540781	GATC	O43716	136 aa	Known RBP	13.22	□□□□□ -0.29
RAP1B-222	ENST00000540781	TWIST1	Q15672	202 aa		13.22	□□□□□ -0.29
RAP1B-222	ENST00000540781	FAM210A	Q96ND0	272 aa		13.22	□□□□□ -0.29
RAP1B-222	ENST00000540781	WFDC2	Q14508	124 aa		13.21	□□□□□ -0.29
RAP1B-222	ENST00000540781	NTM-AS1	Q6ZSK4	140 aa		13.21	□□□□□ -0.29
RAP1B-222	ENST00000540781	CNFN	Q9BYD5	112 aa		13.21	□□□□□ -0.29
RAP1B-222	ENST00000540781	IGKV2D-24	A0A075B6R9	120 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	NDUFS6	O75380	124 aa	Known RBP	13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	PKIA	P61925	76 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	RASL11A	Q6T310	242 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	FAM231D	Q6ZW35	169 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781		Q8N1X5	172 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	SMIM7	Q9BQ49	75 aa		13.2	□□□□□ -0.3
RAP1B-222	ENST00000540781	MPV17L2	Q567V2	206 aa		13.19	□□□□□ -0.3
RAP1B-222	ENST00000540781	C15orf54	Q8N8G6	183 aa		13.19	□□□□□ -0.3
RAP1B-222	ENST00000540781	GTSF1	Q8WW33	167 aa		13.19	□□□□□ -0.3
RAP1B-222	ENST00000540781	TRBV25-1	A0A075B6N4	114 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781		A8MWL6	223 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	LECT2	O14960	151 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	SRP19	P09132	144 aa	Known RBP	13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781		Q0VG73	95 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	BAALC	Q8WXS3	180 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	NIT2	Q9NQR4	276 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	ABCA13	Q86UQ4	5058 aa		13.18	□□□□□ -0.3
RAP1B-222	ENST00000540781	ZNF727	A8MUV8	499 aa		13.17	□□□□□ -0.3
RAP1B-222	ENST00000540781	ANG	P03950	147 aa	Known RBP	13.17	□□□□□ -0.3
RAP1B-222	ENST00000540781	ATRAID	Q6UW56	229 aa		13.17	□□□□□ -0.3
RAP1B-222	ENST00000540781	IGHV1-24	A0A0C4DH33	117 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	CRP	P02741	224 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	XG	P55808	180 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	GAGE6	Q13070	117 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	IQCJ	Q1A5X6	159 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781		Q8N976	141 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	PGLYRP4	Q96LB8	373 aa		13.16	□□□□□ -0.3
RAP1B-222	ENST00000540781	CT83	Q5H943	113 aa		13.15	□□□□□ -0.3
RAP1B-222	ENST00000540781	ENHO	Q6UWT2	76 aa		13.15	□□□□□ -0.3
RAP1B-222	ENST00000540781	SMIM15	Q7Z3B0	74 aa		13.15	□□□□□ -0.3
RAP1B-222	ENST00000540781	LINC01551	Q86U37	167 aa		13.15	□□□□□ -0.3
RAP1B-222	ENST00000540781	RBX1	P62877	108 aa		13.14	□□□□□ -0.31
RAP1B-222	ENST00000540781	C1orf43	Q9BWL3	253 aa		13.14	□□□□□ -0.31
RAP1B-222	ENST00000540781	GATD1	Q8NB37	220 aa		13.13	□□□□□ -0.31
RAP1B-222	ENST00000540781	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	TRAV26-2	A0A0B4J265	109 aa		13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	FOXA3	P55318	350 aa	Predicted RBP	13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	FRZB	Q92765	325 aa		13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	BORCS7	Q96B45	105 aa		13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	TMEM243	Q9BU79	118 aa		13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	OSTC	Q9NRP0	149 aa		13.12	□□□□□ -0.31
RAP1B-222	ENST00000540781	TEX261	Q6UWH6	196 aa		13.11	□□□□□ -0.31
RAP1B-222	ENST00000540781	DEFB104A	Q8WTQ1	72 aa		13.11	□□□□□ -0.31
RAP1B-222	ENST00000540781	TSKU	Q8WUA8	353 aa		13.11	□□□□□ -0.31
RAP1B-222	ENST00000540781	TMEM70	Q9BUB7	260 aa		13.11	□□□□□ -0.31
RAP1B-222	ENST00000540781	COTL1	Q14019	142 aa		13.1	□□□□□ -0.31
RAP1B-222	ENST00000540781	MIA	Q16674	131 aa		13.1	□□□□□ -0.31
RAP1B-222	ENST00000540781	TMEM241	Q24JQ0	296 aa		13.1	□□□□□ -0.31
RAP1B-222	ENST00000540781	FAM74A3	Q4VXF1	159 aa		13.1	□□□□□ -0.31
RAP1B-222	ENST00000540781	CLPSL2	Q6UWE3	100 aa		13.09	□□□□□ -0.31
RAP1B-222	ENST00000540781	LINC00269	Q8N2A0	174 aa		13.09	□□□□□ -0.31
RAP1B-222	ENST00000540781	GFRA4	Q9GZZ7	299 aa		13.09	□□□□□ -0.31
RAP1B-222	ENST00000540781	PRR34	Q9NV39	138 aa		13.09	□□□□□ -0.31
RAP1B-222	ENST00000540781	HIGD1C	A8MV81	97 aa		13.08	□□□□□ -0.32
RAP1B-222	ENST00000540781	AMT	P48728	403 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms