RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 C9orf62Q8N4C0 152 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 OR2D3Q8NGH3 330 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 TMEM70Q9BUB7 260 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 URGCP-MRPS24S4R325 110 aa11.05□□□□□ -0.64
DDB1-215ENST00000539712 LCE2BO14633 110 aa11.04□□□□□ -0.64
DDB1-215ENST00000539712 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
DDB1-215ENST00000539712 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
DDB1-215ENST00000539712 VAX2Q9UIW0 290 aa11.04□□□□□ -0.64
DDB1-215ENST00000539712 A0A087WX48 190 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 F5H697 171 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 Q5VSD8 79 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 ENHOQ6UWT2 76 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 FER1L6-AS1Q8NA97 138 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 UBE2WQ96B02 151 aa11.03□□□□□ -0.64
DDB1-215ENST00000539712 M0QY20 66 aa11.02□□□□□ -0.65
DDB1-215ENST00000539712 RPS20P60866 119 aaKnown RBP11.02□□□□□ -0.65
DDB1-215ENST00000539712 DAZAP1Q96EP5 407 aaKnown RBP11.02□□□□□ -0.65
DDB1-215ENST00000539712 AP1S3Q96PC3 154 aa11.02□□□□□ -0.65
DDB1-215ENST00000539712 COX11Q9Y6N1 276 aa11.02□□□□□ -0.65
DDB1-215ENST00000539712 IGKV2D-24A0A075B6R9 120 aa11.01□□□□□ -0.65
DDB1-215ENST00000539712 IFNA1P01562 189 aa11.01□□□□□ -0.65
DDB1-215ENST00000539712 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
DDB1-215ENST00000539712 Q6ZSA8 131 aa11.01□□□□□ -0.65
DDB1-215ENST00000539712 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
DDB1-215ENST00000539712 TMEM262E9PQX1 116 aa11□□□□□ -0.65
DDB1-215ENST00000539712 P01737 135 aa11□□□□□ -0.65
DDB1-215ENST00000539712 ELOBQ15370 118 aa11□□□□□ -0.65
DDB1-215ENST00000539712 NUDT10Q8NFP7 164 aa11□□□□□ -0.65
DDB1-215ENST00000539712 RMI2Q96E14 147 aa11□□□□□ -0.65
DDB1-215ENST00000539712 NUDT11Q96G61 164 aa11□□□□□ -0.65
DDB1-215ENST00000539712 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
DDB1-215ENST00000539712 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
DDB1-215ENST00000539712 F2Z2F3 143 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 K7EN84 100 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 CACNG7P62955 275 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 SUMO4Q6EEV6 95 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 LYZL1Q6UWQ5 148 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 Q8N976 141 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 FRZBQ92765 325 aa10.99□□□□□ -0.65
DDB1-215ENST00000539712 hCG_2014768A0A024R1R8 64 aa10.98□□□□□ -0.65
DDB1-215ENST00000539712 TAGLN2P37802 199 aaKnown RBP10.98□□□□□ -0.65
DDB1-215ENST00000539712 LINC01620Q4KN68 170 aa10.98□□□□□ -0.65
DDB1-215ENST00000539712 C15orf54Q8N8G6 183 aa10.98□□□□□ -0.65
DDB1-215ENST00000539712 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
DDB1-215ENST00000539712 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
DDB1-215ENST00000539712 INAFM2P0DMQ5 153 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 NTF3P20783 257 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 CTRLP40313 264 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 Q0VG73 95 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 ALKAL2Q6UX46 152 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 CHCHD5Q9BSY4 110 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 CNFNQ9BYD5 112 aa10.97□□□□□ -0.65
DDB1-215ENST00000539712 DMBT1Q9UGM3 2413 aaPredicted RBP10.96□□□□□ -0.65
DDB1-215ENST00000539712 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 MGPP08493 103 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 IQCJQ1A5X6 159 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 TMEM97Q5BJF2 176 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 WDR73Q6P4I2 378 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 KRTAP26-1Q6PEX3 210 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
DDB1-215ENST00000539712 BIN3Q9NQY0 253 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 PRR34Q9NV39 138 aa10.96□□□□□ -0.65
DDB1-215ENST00000539712 ANGP03950 147 aaKnown RBP10.95□□□□□ -0.66
DDB1-215ENST00000539712 RBX1P62877 108 aa10.95□□□□□ -0.66
DDB1-215ENST00000539712 NKX2-5P52952 324 aaPredicted RBP10.94□□□□□ -0.66
DDB1-215ENST00000539712 GAGE6Q13070 117 aa10.94□□□□□ -0.66
DDB1-215ENST00000539712 RASL11AQ6T310 242 aa10.94□□□□□ -0.66
DDB1-215ENST00000539712 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.94□□□□□ -0.66
DDB1-215ENST00000539712 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
DDB1-215ENST00000539712 C1orf43Q9BWL3 253 aa10.94□□□□□ -0.66
DDB1-215ENST00000539712 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
DDB1-215ENST00000539712 TRBV25-1A0A075B6N4 114 aa10.93□□□□□ -0.66
DDB1-215ENST00000539712 FAM229AH3BQW9 127 aa10.93□□□□□ -0.66
DDB1-215ENST00000539712 H7C1H1 209 aa10.93□□□□□ -0.66
DDB1-215ENST00000539712 PKIAP61925 76 aa10.93□□□□□ -0.66
DDB1-215ENST00000539712 DPH3P1Q9H4G8 78 aa10.93□□□□□ -0.66
DDB1-215ENST00000539712 TMEM250H0YL14 139 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 TRGC1P0CF51 173 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 MIAQ16674 131 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 NIT2Q9NQR4 276 aa10.92□□□□□ -0.66
DDB1-215ENST00000539712 IGHV1-24A0A0C4DH33 117 aa10.91□□□□□ -0.66
DDB1-215ENST00000539712 CRPP02741 224 aa10.91□□□□□ -0.66
DDB1-215ENST00000539712 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
DDB1-215ENST00000539712 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
DDB1-215ENST00000539712 TWIST1Q15672 202 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 GATD1Q8NB37 220 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 PGLYRP4Q96LB8 373 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 GFRA4Q9GZZ7 299 aa10.9□□□□□ -0.66
DDB1-215ENST00000539712 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms