RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LRCOL1A6NCL2 159 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 K7ERJ3 54 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 AVPP01185 164 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 CRYGBP07316 175 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 PSMB8P28062 276 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 TRAV12-1A0A0B4J245 112 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 K7EMI3 77 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 MAJINQ3KP22 176 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 GDF5OSQ5U4N7 250 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 RAI1Q7Z5J4 1906 aaPredicted RBP4.04□□□□□ -1.76
LRP6-203ENST00000538239 K7EQG2 157 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 LINC00269Q8N2A0 174 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 DAND5Q8N907 189 aa4.04□□□□□ -1.76
LRP6-203ENST00000538239 CEMP1Q6PRD7 247 aaPredicted RBP4.03□□□□□ -1.76
LRP6-203ENST00000538239 TNRC6BQ9UPQ9 1833 aaKnown RBP4.03□□□□□ -1.76
LRP6-203ENST00000538239 KIAA1549Q9HCM3 1950 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 TRBV6-1A0A0K0K1D8 114 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 BRWD1-AS2P59051 145 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 HAMPP81172 84 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 C4orf48Q5BLP8 95 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 MED13LQ71F56 2210 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 COX8AP10176 69 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
LRP6-203ENST00000538239 IGHV4-28A0A0C4DH34 117 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 SMIM9A6NGZ8 99 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 MED14OSP0DP75 135 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 MBD6Q96DN6 1003 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 BBC3Q96PG8 261 aaPredicted RBP4.03□□□□□ -1.76
LRP6-203ENST00000538239 PLA2G2EQ9NZK7 142 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 PRO1854Q9UHT4 67 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 ZNF80P51504 273 aaPredicted RBP4.03□□□□□ -1.76
LRP6-203ENST00000538239 EBI3Q14213 229 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 ANAPC13Q9BS18 74 aa4.03□□□□□ -1.76
LRP6-203ENST00000538239 MIFP14174 115 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
LRP6-203ENST00000538239 ADAMTS20P59510 1910 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 BAALCQ8WXS3 180 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 C10orf91Q5T1B1 145 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 REG3AQ06141 175 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 TRAV10A0A0B4J240 114 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 CARD19Q96LW7 228 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 A0A0J9YWU9 116 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 TOMM6Q96B49 74 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 SIGMAR1Q99720 223 aa4.02□□□□□ -1.77
LRP6-203ENST00000538239 C10orf142B7Z368 130 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 INAFM2P0DMQ5 153 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 LINC00173Q6ZV60 143 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 HIVEP2P31629 2446 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 Q6ZUT4 128 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 GTSF1LQ9H1H1 148 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 ZFAND3Q9H8U3 227 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 CTRLP40313 264 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 NANOS2P60321 138 aaKnown RBP4.01□□□□□ -1.77
LRP6-203ENST00000538239 PCP2Q8IVA1 136 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 LYPD6BQ8NI32 183 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 CREBBPQ92793 2442 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 PRSS47A8MTI9 375 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 P0C879 139 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 BDP1A6H8Y1 2624 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 LECT2O14960 151 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 EIF4EBP1Q13541 118 aaPredicted RBP4.01□□□□□ -1.77
LRP6-203ENST00000538239 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 UBL5Q9BZL1 73 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 TTC28Q96AY4 2481 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 TANC2Q9HCD6 1990 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 ODF3Q96PU9 254 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 MUSTN1Q8IVN3 82 aa4.01□□□□□ -1.77
LRP6-203ENST00000538239 NDUFS6O75380 124 aaKnown RBP4□□□□□ -1.77
LRP6-203ENST00000538239 IGLC3P0DOY3 106 aa4□□□□□ -1.77
LRP6-203ENST00000538239 ZNF295-AS1Q8N0V1 137 aa4□□□□□ -1.77
LRP6-203ENST00000538239 RETNQ9HD89 108 aa4□□□□□ -1.77
LRP6-203ENST00000538239 TRBV10-1A0A0K0K1A3 114 aa4□□□□□ -1.77
LRP6-203ENST00000538239 PRM2P04554 102 aa4□□□□□ -1.77
LRP6-203ENST00000538239 PROK1P58294 105 aa4□□□□□ -1.77
LRP6-203ENST00000538239 Q8N6K4 173 aa4□□□□□ -1.77
LRP6-203ENST00000538239 A0A1W2PPR1 153 aa4□□□□□ -1.77
LRP6-203ENST00000538239 NDUFA7O95182 113 aa4□□□□□ -1.77
LRP6-203ENST00000538239 TRBV20-1A0A075B6N2 111 aa4□□□□□ -1.77
LRP6-203ENST00000538239 C9orf118A6NHY6 69 aa4□□□□□ -1.77
LRP6-203ENST00000538239 IGHV4-30-4P0DP06 118 aa4□□□□□ -1.77
LRP6-203ENST00000538239 ZFAND2AQ8N6M9 145 aa4□□□□□ -1.77
LRP6-203ENST00000538239 B9D2Q9BPU9 175 aa4□□□□□ -1.77
LRP6-203ENST00000538239 EDN2P20800 178 aa4□□□□□ -1.77
LRP6-203ENST00000538239 CHCHD10Q8WYQ3 142 aaPredicted RBP4□□□□□ -1.77
LRP6-203ENST00000538239 SHANK1Q9Y566 2161 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 CXCL5P42830 114 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 SIVA1O15304 175 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 C12orf74Q32Q52 190 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 CFAP126Q5VTH2 177 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 CPAMD8Q8IZJ3 1885 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
LRP6-203ENST00000538239 NEXN-AS1Q8NBZ9 246 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms