RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 NTF3P20783 257 aa8.97□□□□□ -0.97
CHFR-216ENST00000538235 RHOHQ15669 191 aa8.97□□□□□ -0.97
CHFR-216ENST00000538235 GAGE12JA6NER3 117 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 HIGD1CA8MV81 97 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 GAS8-AS1O95177 125 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 GAGE1Q13065 139 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 GAGE4Q13068 117 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 GAGE5Q13069 117 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 GAGE13Q4V321 117 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 COA6Q5JTJ3 125 aaKnown RBP8.96□□□□□ -0.98
CHFR-216ENST00000538235 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 Q6ZR54 194 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 WFDC10BQ8IUB3 73 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 OR10G8Q8NGN5 311 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 OR10D4PQ8NGN7 298 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 TSKUQ8WUA8 353 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 ANAPC16Q96DE5 110 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 MRPS16Q9Y3D3 137 aaKnown RBP8.96□□□□□ -0.98
CHFR-216ENST00000538235 DNAH11Q96DT5 4516 aa8.96□□□□□ -0.98
CHFR-216ENST00000538235 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 M0R2N4 97 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 RHODO00212 210 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 CACNG7P62955 275 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 SLAQ13239 276 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 JOSD1Q15040 202 aaPredicted RBP8.95□□□□□ -0.98
CHFR-216ENST00000538235 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 PYY3Q5JQD4 70 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
CHFR-216ENST00000538235 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 Q8N3U1 123 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 NEXN-AS1Q8NBZ9 246 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
CHFR-216ENST00000538235 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 XKRY2A2RUG3 117 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 A8MWL6 223 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 SRIP30626 198 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 ZNF56Q15929 161 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 SUMO4Q6EEV6 95 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 KCNIP4Q6PIL6 250 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 PACRGQ96M98 296 aaPredicted RBP8.94□□□□□ -0.98
CHFR-216ENST00000538235 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
CHFR-216ENST00000538235 TRAV26-2A0A0B4J265 109 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 F2Z2F3 143 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 CIDEAO60543 219 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 MGPP08493 103 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 C14orf144Q96I85 54 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 IMMP2LQ96T52 175 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 GFRA4Q9GZZ7 299 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 PKD1P98161 4303 aa8.93□□□□□ -0.98
CHFR-216ENST00000538235 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 M0QY20 66 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 UBE2D3P61077 147 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 UBE2D2P62837 147 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 TWIST1Q15672 202 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 RNF185Q96GF1 192 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
CHFR-216ENST00000538235 TRGC1P0CF51 173 aa8.91□□□□□ -0.98
CHFR-216ENST00000538235 CCL18P55774 89 aa8.91□□□□□ -0.98
CHFR-216ENST00000538235 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
CHFR-216ENST00000538235 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
CHFR-216ENST00000538235 TRAV9-1A0A075B6T8 112 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 IGHV3-38A0A0C4DH36 116 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 FAM231BA6NCW3 169 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 RTL8CO15255 209 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 TRGC2P03986 189 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 FABP4P15090 132 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 GATD1Q8NB37 220 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.98
CHFR-216ENST00000538235 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
CHFR-216ENST00000538235 NBDYA0A0U1RRE5 68 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 TIRAPP58753 221 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 NTM-AS1Q6ZSK4 140 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 DEFB104AQ8WTQ1 72 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 Q9H8V8 135 aa8.89□□□□□ -0.99
CHFR-216ENST00000538235 TRBV10-1A0A0K0K1A3 114 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 F5H697 171 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 M0R143 59 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 COX19Q49B96 90 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms