RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CRYGDP07320 174 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 KRTAP1-1Q07627 177 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 CD300EQ496F6 205 aaPredicted RBP4.88□□□□□ -1.63
USP28-206ENST00000538224 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 STHQ8IWL8 128 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 ZNF479Q96JC4 524 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 DNAJC30Q96LL9 226 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 CST9LQ9H4G1 147 aa4.88□□□□□ -1.63
USP28-206ENST00000538224 ZFHX3Q15911 3703 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
USP28-206ENST00000538224 TRBV25-1A0A075B6N4 114 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 RBMY1BA6NDE4 496 aaKnown RBP4.87□□□□□ -1.63
USP28-206ENST00000538224 RBMY1EA6NEQ0 496 aaKnown RBP4.87□□□□□ -1.63
USP28-206ENST00000538224 IGIPA6NJ69 53 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 SPRY2O43597 315 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 RBMY1DP0C7P1 496 aaKnown RBP4.87□□□□□ -1.63
USP28-206ENST00000538224 CRYBA4P53673 196 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 HILS1P60008 231 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 VAMP3Q15836 100 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 JPT2Q9H910 190 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 ESM1Q9NQ30 184 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 TP73-AS1Q9UF72 201 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 MYO9AB2RTY4 2548 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 AGRNO00468 2067 aa4.87□□□□□ -1.63
USP28-206ENST00000538224 CSMD2Q7Z408 3487 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 IGKV2D-26A0A0A0MRZ7 120 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 MYMXA0A1B0GTQ4 84 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 C11orf86A6NJI1 115 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 TSHBP01222 138 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 RBMY1A1P0DJD3 496 aaKnown RBP4.86□□□□□ -1.63
USP28-206ENST00000538224 RBMY1CP0DJD4 496 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 CD28P10747 220 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 RBMY1FQ15415 496 aaKnown RBP4.86□□□□□ -1.63
USP28-206ENST00000538224 BEAN1Q3B7T3 259 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 GTF2H5Q6ZYL4 71 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 C20orf203Q8NBC4 194 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 LINC01006Q8NI28 216 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 LINC01587Q99440 93 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 C1QTNF4Q9BXJ3 329 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 TNFRSF18Q9Y5U5 241 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 DOPEY2Q9Y3R5 2298 aa4.86□□□□□ -1.63
USP28-206ENST00000538224 TRAV8-6A0A0B4J262 113 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 C9orf118A6NHY6 69 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 RS1O15537 224 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 SMIM13P0DJ93 91 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 GCSHP23434 173 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 SMAGPQ0VAQ4 97 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 ODF3L2Q3SX64 289 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 MORN3Q6PF18 240 aaPredicted RBP4.85□□□□□ -1.63
USP28-206ENST00000538224 NEGR1Q7Z3B1 354 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 NFE4Q86UQ8 179 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 CEND1Q8N111 149 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 CITED2Q99967 270 aaPredicted RBP4.85□□□□□ -1.63
USP28-206ENST00000538224 PRADC1Q9BSG0 188 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 TM2D2Q9BX73 214 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 PYGO1Q9Y3Y4 419 aa4.85□□□□□ -1.63
USP28-206ENST00000538224 PDZD2O15018 2839 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 NACAE9PAV3 2078 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 A0A1W2PRX2 142 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 SAP30O75446 220 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 HTN1P15515 57 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 TCTAP57738 103 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 CFAP126Q5VTH2 177 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 UFSP1Q6NVU6 142 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 NDUFA11Q86Y39 141 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 C11orf72Q8NBR9 251 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 OR5A1Q8NGJ0 315 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 TMEM263Q8WUH6 116 aaKnown RBP4.84□□□□□ -1.63
USP28-206ENST00000538224 SPANXA1Q9NS26 97 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 CHD6Q8TD26 2715 aa4.84□□□□□ -1.63
USP28-206ENST00000538224 TRBV10-1A0A0K0K1A3 114 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 G3V4G9 280 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 IGLV1-51P01701 117 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 PROK1P58294 105 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 RPL39P62891 51 aaKnown RBP4.83□□□□□ -1.64
USP28-206ENST00000538224 SCGB1D4Q6XE38 83 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 C16orf74Q96GX8 76 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 VCX2Q9H322 139 aa4.83□□□□□ -1.64
USP28-206ENST00000538224 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 TRBV7-3A0A075B6L6 115 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 GAGE10A6NGK3 116 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 LEPROTO15243 131 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 FABP2P12104 132 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
USP28-206ENST00000538224 TMEM170BQ5T4T1 132 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 AMMECR1LQ6DCA0 310 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 HIST2H2BCQ6DN03 193 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 C11orf44Q8N8P7 122 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
USP28-206ENST00000538224 TIMM21Q9BVV7 248 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms