RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 C1orf43Q9BWL3 253 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 ZNF471Q9BX82 626 aaPredicted RBP5.49□□□□□ -1.53
USP28-203ENST00000537490 ANGP03950 147 aaKnown RBP5.48□□□□□ -1.53
USP28-203ENST00000537490 S100A9P06702 114 aaKnown RBP5.48□□□□□ -1.53
USP28-203ENST00000537490 CXCL1P09341 107 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 SSTP61278 116 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 SPANXN1Q5VSR9 72 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 KCNRGQ8N5I3 272 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 CHCHD5Q9BSY4 110 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
USP28-203ENST00000537490 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 F5H697 171 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 IGLV2-8P01709 118 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 CRPP02741 224 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 PRSS1P07477 247 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 OR5AL1P0C617 328 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 TMUB2Q71RG4 321 aa5.47□□□□□ -1.53
USP28-203ENST00000537490 UMAD1C9J7I0 102 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 PFDN1O60925 122 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 HLA-DQA1P01909 254 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 RBX1P62877 108 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 GAGE6Q13070 117 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 MIAQ16674 131 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 CLPSL2Q6UWE3 100 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 DERL1Q9BUN8 251 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 VAX2Q9UIW0 290 aa5.46□□□□□ -1.54
USP28-203ENST00000537490 OXTP01178 125 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 GZMBP10144 247 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 CCL20P78556 96 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 ZNF345Q14585 488 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 RGS21Q2M5E4 152 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 C9orf163Q8N9P6 203 aa5.45□□□□□ -1.54
USP28-203ENST00000537490 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.45□□□□□ -1.54
USP28-203ENST00000537490 TRBV25-1A0A075B6N4 114 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 HMSDA8MTL9 139 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 PANO1I0J062 215 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 M0QY20 66 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 IGLC6P0CF74 106 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 SMIM17P0DL12 118 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 RPL35P42766 123 aaKnown RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 HNRNPA3P51991 378 aaKnown RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 PKIAP61925 76 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 DGAT2L7PQ6IED9 249 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 DAZAP1Q96EP5 407 aaKnown RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
USP28-203ENST00000537490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
USP28-203ENST00000537490 A0A0D9SG52 128 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 KANTRA0A1W2PQU2 76 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 BCL2L11O43521 198 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 MGPP08493 103 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 IQCJQ1A5X6 159 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 SUMO4Q6EEV6 95 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 SDIM1Q6ZPB5 146 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 FER1L6-AS1Q8NA97 138 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 C20orf203Q8NBC4 194 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 OR2D3Q8NGH3 330 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 C11orf52Q96A22 123 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 TPPP3Q9BW30 176 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 GNG13Q9P2W3 67 aa5.43□□□□□ -1.54
USP28-203ENST00000537490 IGLV4-60A0A075B6I1 120 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 IGLV10-54A0A075B6I4 117 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 IGHV1-24A0A0C4DH33 117 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 RAB19A4D1S5 217 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 C19orf71A6NCJ1 209 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 NKX2-5P52952 324 aaPredicted RBP5.42□□□□□ -1.54
USP28-203ENST00000537490 REG3AQ06141 175 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 CENPWQ5EE01 88 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 GFRA4Q9GZZ7 299 aa5.42□□□□□ -1.54
USP28-203ENST00000537490 TRAV1-1A0A0B4J248 108 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 SLPIP03973 132 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
USP28-203ENST00000537490 CACNG7P62955 275 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 EIF5AP63241 154 aaKnown RBP5.41□□□□□ -1.54
USP28-203ENST00000537490 RASL11AQ6T310 242 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 CLRN3Q8NCR9 226 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 MANBALQ9NQG1 85 aa5.41□□□□□ -1.54
USP28-203ENST00000537490 A0A1B0GUV1 79 aa5.4□□□□□ -1.54
USP28-203ENST00000537490 H7C1H1 209 aa5.4□□□□□ -1.54
USP28-203ENST00000537490 RAB5CP51148 216 aa5.4□□□□□ -1.54
USP28-203ENST00000537490 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
USP28-203ENST00000537490 LYZL1Q6UWQ5 148 aa5.4□□□□□ -1.54
USP28-203ENST00000537490 TMEM243Q9BU79 118 aa5.4□□□□□ -1.54
USP28-203ENST00000537490 TRBV20OR9-2A0A075B6H5 130 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 TRAV8-4A0A0B4J246 113 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 hDV102S1A0JD36 115 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 F2Z2F3 143 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 P01737 135 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 NTF3P20783 257 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 GNG4P50150 75 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 CIRBPQ14011 172 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms