RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 SH2D6Q7Z4S9 175 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 VMO1Q7Z5L0 202 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 BAALCQ8WXS3 180 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
CHD4-206ENST00000536999 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 Q9UFV3 132 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
CHD4-206ENST00000536999 TRAV8-2A0A0B4J237 113 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 TRAV8-4A0A0B4J246 113 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 J3QQQ9 107 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 K7EMT4 169 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 TIMM17BO60830 172 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 IGHV3-30P01768 117 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 APELAP0DMC3 54 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 IGHV3-30-5P0DP03 117 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 CRIP2P52943 208 aaPredicted RBP4.44□□□□□ -1.7
CHD4-206ENST00000536999 NSUN5P1Q3KNT7 163 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 ASPHD1Q5U4P2 390 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
CHD4-206ENST00000536999 WFDC3Q8IUB2 231 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 Q8TAT8 98 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 OVOL2Q9BRP0 275 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 CDIP1Q9H305 208 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 PYGO1Q9Y3Y4 419 aa4.44□□□□□ -1.7
CHD4-206ENST00000536999 DSCAMO60469 2012 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 IGHV7-81A0A0B4J1V7 117 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 IGIPA6NJ69 53 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
CHD4-206ENST00000536999 H3BVH4 76 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 DUSP14O95147 198 aaKnown RBP4.43□□□□□ -1.7
CHD4-206ENST00000536999 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 AMTNQ6UX39 209 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 CARD19Q96LW7 228 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 EDA2RQ9HAV5 297 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
CHD4-206ENST00000536999 LGALS9O00182 355 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 POLR2KP53803 58 aaKnown RBP4.42□□□□□ -1.7
CHD4-206ENST00000536999 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
CHD4-206ENST00000536999 FXYD7P58549 80 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 Q1RN00 199 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 RUSC1-AS1Q66K80 236 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 ZFP2Q6ZN57 461 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 Q8N9W7 124 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 RASL10AQ92737 203 aa4.42□□□□□ -1.7
CHD4-206ENST00000536999 ZNF256Q9Y2P7 627 aaPredicted RBP4.42□□□□□ -1.7
CHD4-206ENST00000536999 ANK3Q12955 4377 aaKnown RBP4.41□□□□□ -1.7
CHD4-206ENST00000536999 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.41□□□□□ -1.7
CHD4-206ENST00000536999 TMEM89A2RUT3 159 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 C9JAW5 83 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 H3BMM0 161 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 I3L3M4 83 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 PF4P02776 101 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 TRGV3P03979 118 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 MGPP08493 103 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 EFNA4P52798 201 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 SNRPD3P62318 126 aaKnown RBP4.41□□□□□ -1.7
CHD4-206ENST00000536999 ZNF575Q86XF7 245 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 C14orf178Q8N769 122 aaPredicted RBP4.41□□□□□ -1.7
CHD4-206ENST00000536999 PTH2Q96A98 100 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 UBE2WQ96B02 151 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 CITED1Q99966 193 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 TP53TG1Q9Y2A0 90 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 MOB4Q9Y3A3 225 aa4.41□□□□□ -1.7
CHD4-206ENST00000536999 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.7
CHD4-206ENST00000536999 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 TRAV41A0A0B4J266 112 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 F5H697 171 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 TCL1BO95988 128 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 IGHV3-33P01772 117 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 IGF1P05019 195 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 INAFM2P0DMQ5 153 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 CXCL5P42830 114 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 XGP55808 180 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 DEFB121Q5J5C9 76 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 C2orf82Q6UX34 121 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 CLEC19AQ6UXS0 136 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 GPHB5Q86YW7 130 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 LRRC75A-AS1Q8N1F1 130 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 ZFAND2AQ8N6M9 145 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 RNF152Q8N8N0 203 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 PRR14LQ5THK1 2151 aa4.4□□□□□ -1.71
CHD4-206ENST00000536999 ABCA1O95477 2261 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 CLPSL1A2RUU4 121 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 KLLNB2CW77 178 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 MT-ATP8P03928 68 aa4.39□□□□□ -1.71
CHD4-206ENST00000536999 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms