RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 UFSP1Q6NVU6 142 aa12.22□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
TNFRSF1A-209ENST00000536717 SRIP30626 198 aa12.21□□□□□ -0.45
TNFRSF1A-209ENST00000536717 RPS10P5Q9NQ39 176 aa12.21□□□□□ -0.45
TNFRSF1A-209ENST00000536717 A0A087WWC5 75 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 EVI2AP22794 236 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 ZNF56Q15929 161 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 IMMP2LQ96T52 175 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 TMEM242Q9NWH2 141 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.46
TNFRSF1A-209ENST00000536717 F5H697 171 aa12.2□□□□□ -0.46
TNFRSF1A-209ENST00000536717 RHOHQ15669 191 aa12.2□□□□□ -0.46
TNFRSF1A-209ENST00000536717 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
TNFRSF1A-209ENST00000536717 PRADC1Q9BSG0 188 aa12.2□□□□□ -0.46
TNFRSF1A-209ENST00000536717 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
TNFRSF1A-209ENST00000536717 RYR1P21817 5038 aa12.19□□□□□ -0.46
TNFRSF1A-209ENST00000536717 MGPP08493 103 aa12.19□□□□□ -0.46
TNFRSF1A-209ENST00000536717 RAB4BP61018 213 aa12.19□□□□□ -0.46
TNFRSF1A-209ENST00000536717 KCNIP4Q6PIL6 250 aa12.19□□□□□ -0.46
TNFRSF1A-209ENST00000536717 A0A1B0GW15 77 aa12.18□□□□□ -0.46
TNFRSF1A-209ENST00000536717 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 S100PP25815 95 aa12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 LINC00315P59091 139 aa12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 MRPL54Q6P161 138 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 Q6ZSN1 163 aa12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
TNFRSF1A-209ENST00000536717 S100A8P05109 93 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 CAMPP49913 170 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 HBBP68871 147 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 Q6ZRN7 208 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
TNFRSF1A-209ENST00000536717 HSPG2P98160 4391 aa12.15□□□□□ -0.46
TNFRSF1A-209ENST00000536717 SCO1O75880 301 aa12.15□□□□□ -0.46
TNFRSF1A-209ENST00000536717 TRAV9-1A0A075B6T8 112 aa12.14□□□□□ -0.47
TNFRSF1A-209ENST00000536717 TRBV10-1A0A0K0K1A3 114 aa12.14□□□□□ -0.47
TNFRSF1A-209ENST00000536717 H7C1H1 209 aa12.14□□□□□ -0.47
TNFRSF1A-209ENST00000536717 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
TNFRSF1A-209ENST00000536717 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
TNFRSF1A-209ENST00000536717 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
TNFRSF1A-209ENST00000536717 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
TNFRSF1A-209ENST00000536717 TIRAPP58753 221 aa12.12□□□□□ -0.47
TNFRSF1A-209ENST00000536717 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
TNFRSF1A-209ENST00000536717 APOBP04114 4563 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-209ENST00000536717 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GAGE12JA6NER3 117 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 M0QY20 66 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GAGE1Q13065 139 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GAGE4Q13068 117 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GAGE5Q13069 117 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 FRZBQ92765 325 aa12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-209ENST00000536717 RAB4AP20338 218 aa12.1□□□□□ -0.47
TNFRSF1A-209ENST00000536717 RASL11AQ6T310 242 aa12.1□□□□□ -0.47
TNFRSF1A-209ENST00000536717 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
TNFRSF1A-209ENST00000536717 Q9UF83 564 aa12.1□□□□□ -0.47
TNFRSF1A-209ENST00000536717 TRBV7-3A0A075B6L6 115 aa12.09□□□□□ -0.47
TNFRSF1A-209ENST00000536717 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
TNFRSF1A-209ENST00000536717 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
TNFRSF1A-209ENST00000536717 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
TNFRSF1A-209ENST00000536717 RNF185Q96GF1 192 aa12.09□□□□□ -0.47
TNFRSF1A-209ENST00000536717 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 TRAV26-2A0A0B4J265 109 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 K7EP13 123 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 KRTAP10-2P60368 255 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 ATP6V0E2Q8NHE4 81 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 MRAP2Q96G30 205 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
TNFRSF1A-209ENST00000536717 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
TNFRSF1A-209ENST00000536717 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
TNFRSF1A-209ENST00000536717 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 NFE4Q86UQ8 179 aa12.06□□□□□ -0.48
TNFRSF1A-209ENST00000536717 UBE2D3P61077 147 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 UBE2D2P62837 147 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 ELOBQ15370 118 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 COX19Q49B96 90 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 LINC01556Q5JQF7 62 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 LELP1Q5T871 98 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
TNFRSF1A-209ENST00000536717 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
TNFRSF1A-209ENST00000536717 PPP1R17O96001 155 aa12.04□□□□□ -0.48
TNFRSF1A-209ENST00000536717 CKS2P33552 79 aa12.04□□□□□ -0.48
TNFRSF1A-209ENST00000536717 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-209ENST00000536717 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
TNFRSF1A-209ENST00000536717 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms