RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 C3orf56Q8N813 242 aa9.57□□□□□ -0.88
CDK5RAP3-202ENST00000536708 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-202ENST00000536708 A0A087WX48 190 aa9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TRAV12-1A0A0B4J245 112 aa9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 RNASE3P12724 160 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 S100A4P26447 101 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 RASL10AQ92737 203 aa9.56□□□□□ -0.88
CDK5RAP3-202ENST00000536708 K7ERJ3 54 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 PPP1R17O96001 155 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 RNASE4P34096 147 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 ID1P41134 155 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 CMYA5Q8N3K9 4069 aa9.55□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TEX48A0A1B0GUV7 120 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 J3KRW8 73 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 GTSCR1Q86UQ5 136 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 CEND1Q8N111 149 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 RPL24P83731 157 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 ZC2HC1BQ5TFG8 222 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 MRPL35Q9NZE8 188 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-202ENST00000536708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 GNRH2O43555 120 aa9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 PLNP26678 52 aa9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 MDFIQ99750 246 aa9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 NHP2Q9NX24 153 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
CDK5RAP3-202ENST00000536708 E9PLD3 99 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 H7C1H1 209 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SCGB1A1P11684 91 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 LINC00315P59091 139 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 TAL2Q16559 108 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 WFDC10AQ9H1F0 79 aa9.52□□□□□ -0.89
CDK5RAP3-202ENST00000536708 NOTCH1P46531 2555 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 IGLL5B9A064 214 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 F8VRH5 84 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 DEFB131AP59861 70 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 MAP6D1Q9H9H5 199 aa9.51□□□□□ -0.89
CDK5RAP3-202ENST00000536708 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 KNCNA6PVL3 124 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 RPL39LQ96EH5 51 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 NBEAL1Q6ZS30 2694 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SPRY2O43597 315 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 CD7P09564 240 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-202ENST00000536708 CIDEAO60543 219 aa9.49□□□□□ -0.89
CDK5RAP3-202ENST00000536708 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
CDK5RAP3-202ENST00000536708 TRAV25A0A0B4J276 109 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 A0A0J9YX75 114 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 MGPP08493 103 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 F8W1H4 67 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
CDK5RAP3-202ENST00000536708 AZU1P20160 251 aa9.47□□□□□ -0.89
CDK5RAP3-202ENST00000536708 C9orf66Q5T8R8 295 aa9.47□□□□□ -0.89
CDK5RAP3-202ENST00000536708 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
CDK5RAP3-202ENST00000536708 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
CDK5RAP3-202ENST00000536708 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 WFDC2Q14508 124 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 BAALCQ8WXS3 180 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 GTSF1LQ9H1H1 148 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.89
CDK5RAP3-202ENST00000536708 RBMY1BA6NDE4 496 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 RBMY1EA6NEQ0 496 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 J3QR89 54 aa9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 RBMY1DP0C7P1 496 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 RRN3P1Q2M238 152 aa9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 WFDC9Q8NEX5 89 aa9.46□□□□□ -0.9
CDK5RAP3-202ENST00000536708 IGHV3-16A0A0C4DH30 117 aa9.45□□□□□ -0.9
CDK5RAP3-202ENST00000536708 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
CDK5RAP3-202ENST00000536708 OXLD1Q5BKU9 147 aa9.45□□□□□ -0.9
CDK5RAP3-202ENST00000536708 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
CDK5RAP3-202ENST00000536708 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
CDK5RAP3-202ENST00000536708 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
CDK5RAP3-202ENST00000536708 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
CDK5RAP3-202ENST00000536708 GAGE12HA6NDE8 117 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms