RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 TNP2Q05952 138 aa15.09■□□□□ 0.01
VPS37C-202ENST00000535818 PNRC1Q12796 327 aaPredicted RBP15.09■□□□□ 0.01
VPS37C-202ENST00000535818 NEXN-AS1Q8NBZ9 246 aa15.09■□□□□ 0.01
VPS37C-202ENST00000535818 BIRC6Q9NR09 4857 aa15.09■□□□□ 0.01
VPS37C-202ENST00000535818 A0A1B0GVY2 172 aa15.08■□□□□ 0
VPS37C-202ENST00000535818 UBE2D3P61077 147 aa15.08■□□□□ 0
VPS37C-202ENST00000535818 UBE2D2P62837 147 aa15.08■□□□□ 0
VPS37C-202ENST00000535818 LINC01556Q5JQF7 62 aa15.08■□□□□ 0
VPS37C-202ENST00000535818 GTSF1Q8WW33 167 aa15.08■□□□□ 0
VPS37C-202ENST00000535818 HIGD1CA8MV81 97 aa15.07■□□□□ 0
VPS37C-202ENST00000535818 PGLYRP4Q96LB8 373 aa15.07■□□□□ 0
VPS37C-202ENST00000535818 V9GYV3 84 aa15.07■□□□□ 0
VPS37C-202ENST00000535818 IGHV3-30P01768 117 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 IGHV3-33P01772 117 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 IGHV3-30-3P0DP02 117 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 IGHV3-30-5P0DP03 117 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 NFE4Q86UQ8 179 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 DNAH17Q9UFH2 4485 aa15.06■□□□□ 0
VPS37C-202ENST00000535818 A0A1B0GUT8 65 aa15.05■□□□□ -0
VPS37C-202ENST00000535818 PPP1R2P9O14990 202 aa15.05■□□□□ -0
VPS37C-202ENST00000535818 NAT8BQ9UHF3 227 aa15.05■□□□□ -0
VPS37C-202ENST00000535818 SUMO4Q6EEV6 95 aa15.04■□□□□ -0
VPS37C-202ENST00000535818 DNAJC30Q96LL9 226 aa15.04■□□□□ -0
VPS37C-202ENST00000535818 TNFRSF18Q9Y5U5 241 aa15.04■□□□□ -0
VPS37C-202ENST00000535818 RIGQ13278 110 aa15.03■□□□□ -0
VPS37C-202ENST00000535818 FAT2Q9NYQ8 4349 aa15.03■□□□□ -0
VPS37C-202ENST00000535818 TMEM97Q5BJF2 176 aa15.02■□□□□ -0
VPS37C-202ENST00000535818 M0QY20 66 aa15.01□□□□□ -0.01
VPS37C-202ENST00000535818 Q6ZRN7 208 aaPredicted RBP15.01□□□□□ -0.01
VPS37C-202ENST00000535818 URGCP-MRPS24S4R325 110 aa15.01□□□□□ -0.01
VPS37C-202ENST00000535818 RASL11AQ6T310 242 aa15□□□□□ -0.01
VPS37C-202ENST00000535818 DAZ4Q86SG3 579 aaKnown RBP15□□□□□ -0.01
VPS37C-202ENST00000535818 FRZBQ92765 325 aa15□□□□□ -0.01
VPS37C-202ENST00000535818 DAZ3Q9NR90 486 aaKnown RBP15□□□□□ -0.01
VPS37C-202ENST00000535818 HECTD4Q9Y4D8 3996 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 SMIM27A0A1W2PRY6 76 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 IBA57-AS1B1ANH7 110 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 MT-ND4LP03901 98 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 KCNIP4Q6PIL6 250 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 COMMD7Q86VX2 200 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 NUP35Q8NFH5 326 aa14.99□□□□□ -0.01
VPS37C-202ENST00000535818 TRBV6-8A0A0A6YYG3 113 aa14.98□□□□□ -0.01
VPS37C-202ENST00000535818 A0A1B0GW15 77 aa14.98□□□□□ -0.01
VPS37C-202ENST00000535818 Q8N3U1 123 aa14.98□□□□□ -0.01
VPS37C-202ENST00000535818 ANAPC16Q96DE5 110 aa14.98□□□□□ -0.01
VPS37C-202ENST00000535818 Q9HAA7 133 aa14.98□□□□□ -0.01
VPS37C-202ENST00000535818 TMEM218A2RU14 115 aa14.97□□□□□ -0.01
VPS37C-202ENST00000535818 F8W036 122 aa14.97□□□□□ -0.01
VPS37C-202ENST00000535818 S100A8P05109 93 aa14.97□□□□□ -0.01
VPS37C-202ENST00000535818 TMEM191AQ9H0A3 160 aa14.97□□□□□ -0.01
VPS37C-202ENST00000535818 NIT2Q9NQR4 276 aa14.97□□□□□ -0.01
VPS37C-202ENST00000535818 A0A087WX48 190 aa14.96□□□□□ -0.01
VPS37C-202ENST00000535818 LINC00862A6NCI5 91 aa14.96□□□□□ -0.01
VPS37C-202ENST00000535818 PKIAP61925 76 aa14.96□□□□□ -0.01
VPS37C-202ENST00000535818 NIT1Q86X76 327 aa14.96□□□□□ -0.01
VPS37C-202ENST00000535818 PSCAO43653 123 aa14.95□□□□□ -0.02
VPS37C-202ENST00000535818 LAGE3Q14657 143 aa14.95□□□□□ -0.02
VPS37C-202ENST00000535818 TRAV26-2A0A0B4J265 109 aa14.94□□□□□ -0.02
VPS37C-202ENST00000535818 TMEM262E9PQX1 116 aa14.94□□□□□ -0.02
VPS37C-202ENST00000535818 EREGO14944 169 aa14.94□□□□□ -0.02
VPS37C-202ENST00000535818 CHCHD5Q9BSY4 110 aa14.94□□□□□ -0.02
VPS37C-202ENST00000535818 SEC11CQ9BY50 192 aa14.94□□□□□ -0.02
VPS37C-202ENST00000535818 GATD1Q8NB37 220 aa14.93□□□□□ -0.02
VPS37C-202ENST00000535818 CHCHD7Q9BUK0 85 aa14.93□□□□□ -0.02
VPS37C-202ENST00000535818 TRBV25-1A0A075B6N4 114 aa14.92□□□□□ -0.02
VPS37C-202ENST00000535818 SPATA12Q7Z6I5 190 aa14.92□□□□□ -0.02
VPS37C-202ENST00000535818 NTM-AS1Q6ZSK4 140 aa14.91□□□□□ -0.02
VPS37C-202ENST00000535818 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
VPS37C-202ENST00000535818 TRAV8-3A0A0A6YYJ7 113 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 IGHV1-24A0A0C4DH33 117 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 PPP1R17O96001 155 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 HBBP68871 147 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 ELOBQ15370 118 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 ATP5L2Q7Z4Y8 100 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 KLK12Q9UKR0 248 aa14.9□□□□□ -0.02
VPS37C-202ENST00000535818 PKD1P98161 4303 aa14.89□□□□□ -0.03
VPS37C-202ENST00000535818 C16orf90A8MZG2 172 aa14.89□□□□□ -0.03
VPS37C-202ENST00000535818 TM2D2Q9BX73 214 aa14.89□□□□□ -0.03
VPS37C-202ENST00000535818 ADCYAP1P18509 176 aa14.88□□□□□ -0.03
VPS37C-202ENST00000535818 RPL39LQ96EH5 51 aaKnown RBP14.88□□□□□ -0.03
VPS37C-202ENST00000535818 CTDSP1Q9GZU7 261 aa14.88□□□□□ -0.03
VPS37C-202ENST00000535818 A0A087WTM6 91 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 CAMPP49913 170 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 COTL1Q14019 142 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 IQCJQ1A5X6 159 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 MPV17L2Q567V2 206 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 AMN1Q8IY45 258 aa14.87□□□□□ -0.03
VPS37C-202ENST00000535818 RAB4AP20338 218 aa14.86□□□□□ -0.03
VPS37C-202ENST00000535818 GAGE6Q13070 117 aa14.86□□□□□ -0.03
VPS37C-202ENST00000535818 MRPL54Q6P161 138 aaKnown RBP14.86□□□□□ -0.03
VPS37C-202ENST00000535818 DEFB104AQ8WTQ1 72 aa14.86□□□□□ -0.03
VPS37C-202ENST00000535818 UBE2WQ96B02 151 aa14.86□□□□□ -0.03
VPS37C-202ENST00000535818 RMI2Q96E14 147 aa14.86□□□□□ -0.03
VPS37C-202ENST00000535818 KRTAP10-2P60368 255 aa14.85□□□□□ -0.03
VPS37C-202ENST00000535818 IMMP2LQ96T52 175 aa14.85□□□□□ -0.03
VPS37C-202ENST00000535818 TMEM243Q9BU79 118 aa14.85□□□□□ -0.03
VPS37C-202ENST00000535818 TRBV6-5A0A0K0K1A5 114 aa14.84□□□□□ -0.03
VPS37C-202ENST00000535818 CRPP02741 224 aa14.84□□□□□ -0.03
VPS37C-202ENST00000535818 ANGP03950 147 aaKnown RBP14.84□□□□□ -0.03
VPS37C-202ENST00000535818 AMTP48728 403 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms