RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 F5H697 171 aa10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 RPL35P42766 123 aaKnown RBP10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 Q8N976 141 aa10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 GNG13Q9P2W3 67 aa10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 SSTP61278 116 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 IFITM2Q01629 132 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 Q0VG73 95 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 FLG2Q5D862 2391 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-204ENST00000535313 RBFOX3A6NFN3 312 aa10.66□□□□□ -0.7
CLSTN3-204ENST00000535313 TEX46H3BTG2 121 aa10.66□□□□□ -0.7
CLSTN3-204ENST00000535313 CRPP02741 224 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 PKIAP61925 76 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 BLOC1S1P78537 153 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 Q6ZSA8 131 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 C11orf52Q96A22 123 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 DAZAP1Q96EP5 407 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 DERL1Q9BUN8 251 aa10.65□□□□□ -0.7
CLSTN3-204ENST00000535313 MYCBP2O75592 4640 aa10.65□□□□□ -0.71
CLSTN3-204ENST00000535313 BCL2P10415 239 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 TMEM97Q5BJF2 176 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 ATRAIDQ6UW56 229 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 C15orf54Q8N8G6 183 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 TPPP3Q9BW30 176 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 C1orf43Q9BWL3 253 aa10.64□□□□□ -0.71
CLSTN3-204ENST00000535313 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-204ENST00000535313 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-204ENST00000535313 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 MEF2BQ02080 365 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 OR2D3Q8NGH3 330 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 KIF25-AS1Q9Y6Z4 181 aa10.62□□□□□ -0.71
CLSTN3-204ENST00000535313 IFNA1P01562 189 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 GZMBP10144 247 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 GNG4P50150 75 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 ENHOQ6UWT2 76 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
CLSTN3-204ENST00000535313 TRBV20OR9-2A0A075B6H5 130 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 XKRY2A2RUG3 117 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 H7C1H1 209 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 PDE6DO43924 150 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 MGPP08493 103 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 CACNG7P62955 275 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
CLSTN3-204ENST00000535313 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 IGLV2-8P01709 118 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 P01737 135 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
CLSTN3-204ENST00000535313 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
CLSTN3-204ENST00000535313 F2Z2F3 143 aa10.58□□□□□ -0.72
CLSTN3-204ENST00000535313 MIAQ16674 131 aa10.58□□□□□ -0.72
CLSTN3-204ENST00000535313 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
CLSTN3-204ENST00000535313 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
CLSTN3-204ENST00000535313 C9JQL5 133 aa10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 M0QY20 66 aa10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 RBX1P62877 108 aa10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 SRSF3P84103 164 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 GAGE6Q13070 117 aa10.57□□□□□ -0.72
CLSTN3-204ENST00000535313 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
CLSTN3-204ENST00000535313 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
CLSTN3-204ENST00000535313 IQCJQ1A5X6 159 aa10.56□□□□□ -0.72
CLSTN3-204ENST00000535313 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
CLSTN3-204ENST00000535313 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
CLSTN3-204ENST00000535313 USP17L23D6RBM5 183 aa10.55□□□□□ -0.72
CLSTN3-204ENST00000535313 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-204ENST00000535313 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
CLSTN3-204ENST00000535313 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
CLSTN3-204ENST00000535313 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
CLSTN3-204ENST00000535313 J3QL48 77 aa10.54□□□□□ -0.72
CLSTN3-204ENST00000535313 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-204ENST00000535313 RASL11AQ6T310 242 aa10.54□□□□□ -0.72
CLSTN3-204ENST00000535313 LYZL1Q6UWQ5 148 aa10.54□□□□□ -0.72
CLSTN3-204ENST00000535313 DPH3P1Q9H4G8 78 aa10.54□□□□□ -0.72
CLSTN3-204ENST00000535313 CIRBP-AS1Q8TBR5 109 aa10.53□□□□□ -0.72
CLSTN3-204ENST00000535313 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 NTF3P20783 257 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 CLLU1Q5K131 121 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 NUDT10Q8NFP7 164 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 NUDT11Q96G61 164 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 TMEM243Q9BU79 118 aa10.52□□□□□ -0.73
CLSTN3-204ENST00000535313 REG3AQ06141 175 aa10.51□□□□□ -0.73
CLSTN3-204ENST00000535313 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms